Analysis of interatomic Contacts of Structural Units in PDB entry:
9EUT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EUT entry

There are 2 chains in PDB entry 9EUT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 728
B	MET 1	SER 728

There are 41 helices in PDB entry 9EUT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	14	Right-handed 310
Helix 2	AA2	A	44	49	Right-handed alpha
Helix 3	AA3	A	60	77	Right-handed alpha
Helix 4	AA4	A	122	135	Right-handed alpha
Helix 5	AA5	A	139	156	Right-handed alpha
Helix 6	AA6	A	191	195	Right-handed 310
Helix 7	AA7	A	196	206	Right-handed alpha
Helix 8	AA8	A	244	255	Right-handed alpha
Helix 9	AA9	A	285	332	Right-handed alpha
Helix 10	AB1	A	334	339	Right-handed alpha
Helix 11	AB2	A	345	349	Right-handed 310
Helix 12	AB3	A	370	382	Right-handed alpha
Helix 13	AB4	A	475	498	Right-handed alpha
Helix 14	AB5	A	498	529	Right-handed alpha
Helix 15	AB6	A	533	565	Right-handed alpha
Helix 16	AB7	A	578	593	Right-handed alpha
Helix 17	AB8	A	611	630	Right-handed alpha
Helix 18	AB9	A	659	666	Right-handed alpha
Helix 19	AC1	A	671	677	Right-handed alpha
Helix 20	AC2	A	685	698	Right-handed alpha
Helix 21	AC3	B	44	50	Right-handed alpha
Helix 22	AC4	B	60	65	Right-handed alpha
Helix 23	AC5	B	65	77	Right-handed alpha
Helix 24	AC6	B	119	121	Right-handed 310
Helix 25	AC7	B	122	135	Right-handed alpha
Helix 26	AC8	B	139	156	Right-handed alpha
Helix 27	AC9	B	191	195	Right-handed 310
Helix 28	AD1	B	196	206	Right-handed alpha
Helix 29	AD2	B	244	254	Right-handed alpha
Helix 30	AD3	B	285	332	Right-handed alpha
Helix 31	AD4	B	334	341	Right-handed alpha
Helix 32	AD5	B	345	349	Right-handed 310
Helix 33	AD6	B	370	382	Right-handed alpha
Helix 34	AD7	B	475	515	Right-handed alpha
Helix 35	AD8	B	515	529	Right-handed alpha
Helix 36	AD9	B	533	565	Right-handed alpha
Helix 37	AE1	B	578	593	Right-handed alpha
Helix 38	AE2	B	611	630	Right-handed alpha
Helix 39	AE3	B	659	665	Right-handed alpha
Helix 40	AE4	B	671	677	Right-handed alpha
Helix 41	AE5	B	685	698	Right-handed alpha

There are 14 sheets in PDB entry 9EUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	23	first strand
Strand 2	A	219	222	anti-parallel
Strand 3	A	38	42	anti-parallel
Strand 4	A	27	32	anti-parallel
Strand 5	A	105	112	anti-parallel
Strand 6	A	93	102	anti-parallel
Strand 7	A	83	90	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	190	first strand
Strand 2	A	171	178	anti-parallel
Strand 3	A	159	165	anti-parallel
Strand 4	A	269	278	anti-parallel
Strand 5	A	258	266	anti-parallel
Strand 6	A	208	211	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	362	366	first strand
Strand 2	A	354	359	anti-parallel
Strand 3	A	422	428	anti-parallel
Strand 4	A	410	417	anti-parallel
Strand 5	A	389	392	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	438	first strand
Strand 2	A	462	467	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	446	448	first strand
Strand 2	A	451	453	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	574	577	first strand
Strand 2	A	607	610	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	598	602	first strand
Strand 2	A	636	643	parallel
Strand 3	A	646	654	anti-parallel
Strand 4	A	710	718	anti-parallel
Strand 5	A	701	707	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	23	first strand
Strand 2	B	219	222	anti-parallel
Strand 3	B	38	42	anti-parallel
Strand 4	B	27	32	anti-parallel
Strand 5	B	105	112	anti-parallel
Strand 6	B	93	102	anti-parallel
Strand 7	B	83	90	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	190	first strand
Strand 2	B	171	178	anti-parallel
Strand 3	B	159	165	anti-parallel
Strand 4	B	269	278	anti-parallel
Strand 5	B	258	266	anti-parallel
Strand 6	B	208	211	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	362	366	first strand
Strand 2	B	354	359	anti-parallel
Strand 3	B	422	428	anti-parallel
Strand 4	B	410	417	anti-parallel
Strand 5	B	389	392	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	433	437	first strand
Strand 2	B	463	467	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	446	448	first strand
Strand 2	B	451	453	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	574	577	first strand
Strand 2	B	607	610	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	598	602	first strand
Strand 2	B	636	643	parallel
Strand 3	B	646	654	anti-parallel
Strand 4	B	710	718	anti-parallel
Strand 5	B	701	707	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EUT

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EUT