Analysis of interatomic Contacts of Structural Units in PDB entry:
9EUY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EUY entry

There are 2 chains in PDB entry 9EUY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 492
B
 MET 1LEU 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 9EUY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
44 50Right-handed alpha
Helix 3
AA3
A
60 78Right-handed alpha
Helix 4
AA4
A
116 134Right-handed alpha
Helix 5
AA5
A
135 137Right-handed 310
Helix 6
AA6
A
139 156Right-handed alpha
Helix 7
AA7
A
191 195Right-handed 310
Helix 8
AA8
A
196 206Right-handed alpha
Helix 9
AA9
A
244 254Right-handed alpha
Helix 10
AB1
A
285 332Right-handed alpha
Helix 11
AB2
A
334 340Right-handed alpha
Helix 12
AB3
A
345 350Right-handed alpha
Helix 13
AB4
A
370 382Right-handed alpha
Helix 14
AB5
A
430 437Right-handed alpha
Helix 15
AB6
A
455 468Right-handed alpha
Helix 16
AB7
A
475 492Right-handed alpha
Helix 17
AB8
B
11 15Right-handed 310
Helix 18
AB9
B
44 50Right-handed alpha
Helix 19
AC1
B
64 77Right-handed alpha
Helix 20
AC2
B
116 134Right-handed alpha
Helix 21
AC3
B
135 137Right-handed 310
Helix 22
AC4
B
139 156Right-handed alpha
Helix 23
AC5
B
191 195Right-handed 310
Helix 24
AC6
B
196 206Right-handed alpha
Helix 25
AC7
B
244 254Right-handed alpha
Helix 26
AC8
B
285 332Right-handed alpha
Helix 27
AC9
B
334 340Right-handed alpha
Helix 28
AD1
B
345 349Right-handed 310
Helix 29
AD2
B
370 382Right-handed alpha
Helix 30
AD3
B
418 421Right-handed 310
Helix 31
AD4
B
432 437Right-handed alpha
Helix 32
AD5
B
455 467Right-handed alpha
Helix 33
AD6
B
475 490Right-handed alpha
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There are 6 sheets in PDB entry 9EUY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
219 222anti-parallel
Strand 3
A
38 42anti-parallel
Strand 4
A
27 32anti-parallel
Strand 5
A
105 112anti-parallel
Strand 6
A
93 102anti-parallel
Strand 7
A
83 90anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 190first strand
Strand 2
A
171 178anti-parallel
Strand 3
A
159 164anti-parallel
Strand 4
A
269 278anti-parallel
Strand 5
A
258 266anti-parallel
Strand 6
A
208 211anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 366first strand
Strand 2
A
354 359anti-parallel
Strand 3
A
422 428anti-parallel
Strand 4
A
410 417anti-parallel
Strand 5
A
389 392anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
219 222anti-parallel
Strand 3
B
38 42anti-parallel
Strand 4
B
27 32anti-parallel
Strand 5
B
105 112anti-parallel
Strand 6
B
93 102anti-parallel
Strand 7
B
83 90anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 190first strand
Strand 2
B
171 178anti-parallel
Strand 3
B
159 164anti-parallel
Strand 4
B
269 278anti-parallel
Strand 5
B
258 266anti-parallel
Strand 6
B
208 211anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
362 366first strand
Strand 2
B
354 359anti-parallel
Strand 3
B
422 428anti-parallel
Strand 4
B
410 417anti-parallel
Strand 5
B
389 392anti-parallel
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