Analysis of interatomic Contacts of Structural Units in PDB entry:
9EV8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EV8 entry

There are 5 chains in PDB entry 9EV8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 37	THR 637
B	ARG 37	THR 637
C	ARG 37	THR 637
D	ARG 37	THR 637
E	ARG 37	THR 637

There are 70 helices in PDB entry 9EV8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	88	98	Right-handed alpha
Helix 2	AA2	A	106	118	Right-handed alpha
Helix 3	AA3	A	178	182	Right-handed 310
Helix 4	AA4	A	196	199	Right-handed 310
Helix 5	AA5	A	310	314	Right-handed 310
Helix 6	AA6	A	362	365	Right-handed 310
Helix 7	AA7	A	367	371	Right-handed 310
Helix 8	AA8	A	382	391	Right-handed alpha
Helix 9	AA9	A	514	536	Right-handed alpha
Helix 10	AB1	A	537	539	Right-handed 310
Helix 11	AB2	A	541	564	Right-handed alpha
Helix 12	AB3	A	565	567	Right-handed 310
Helix 13	AB4	A	574	604	Right-handed alpha
Helix 14	AB5	A	605	636	Right-handed alpha
Helix 15	AB6	B	88	98	Right-handed alpha
Helix 16	AB7	B	106	118	Right-handed alpha
Helix 17	AB8	B	178	182	Right-handed 310
Helix 18	AB9	B	196	199	Right-handed 310
Helix 19	AC1	B	310	314	Right-handed 310
Helix 20	AC2	B	362	365	Right-handed 310
Helix 21	AC3	B	367	371	Right-handed 310
Helix 22	AC4	B	382	391	Right-handed alpha
Helix 23	AC5	B	514	536	Right-handed alpha
Helix 24	AC6	B	537	539	Right-handed 310
Helix 25	AC7	B	541	564	Right-handed alpha
Helix 26	AC8	B	565	567	Right-handed 310
Helix 27	AC9	B	574	604	Right-handed alpha
Helix 28	AD1	B	605	636	Right-handed alpha
Helix 29	AD2	C	88	98	Right-handed alpha
Helix 30	AD3	C	106	118	Right-handed alpha
Helix 31	AD4	C	178	182	Right-handed 310
Helix 32	AD5	C	196	199	Right-handed 310
Helix 33	AD6	C	310	314	Right-handed 310
Helix 34	AD7	C	362	365	Right-handed 310
Helix 35	AD8	C	367	371	Right-handed 310
Helix 36	AD9	C	382	391	Right-handed alpha
Helix 37	AE1	C	514	536	Right-handed alpha
Helix 38	AE2	C	537	539	Right-handed 310
Helix 39	AE3	C	541	564	Right-handed alpha
Helix 40	AE4	C	565	567	Right-handed 310
Helix 41	AE5	C	574	604	Right-handed alpha
Helix 42	AE6	C	605	636	Right-handed alpha
Helix 43	AE7	D	88	98	Right-handed alpha
Helix 44	AE8	D	106	118	Right-handed alpha
Helix 45	AE9	D	178	182	Right-handed 310
Helix 46	AF1	D	196	199	Right-handed 310
Helix 47	AF2	D	310	314	Right-handed 310
Helix 48	AF3	D	362	365	Right-handed 310
Helix 49	AF4	D	367	371	Right-handed 310
Helix 50	AF5	D	382	391	Right-handed alpha
Helix 51	AF6	D	514	536	Right-handed alpha
Helix 52	AF7	D	537	539	Right-handed 310
Helix 53	AF8	D	541	564	Right-handed alpha
Helix 54	AF9	D	565	567	Right-handed 310
Helix 55	AG1	D	574	604	Right-handed alpha
Helix 56	AG2	D	605	636	Right-handed alpha
Helix 57	AG3	E	88	98	Right-handed alpha
Helix 58	AG4	E	106	118	Right-handed alpha
Helix 59	AG5	E	178	182	Right-handed 310
Helix 60	AG6	E	196	199	Right-handed 310
Helix 61	AG7	E	310	314	Right-handed 310
Helix 62	AG8	E	362	365	Right-handed 310
Helix 63	AG9	E	367	371	Right-handed 310
Helix 64	AH1	E	382	391	Right-handed alpha
Helix 65	AH2	E	514	536	Right-handed alpha
Helix 66	AH3	E	537	539	Right-handed 310
Helix 67	AH4	E	541	564	Right-handed alpha
Helix 68	AH5	E	565	567	Right-handed 310
Helix 69	AH6	E	574	604	Right-handed alpha
Helix 70	AH7	E	605	636	Right-handed alpha

There are 30 sheets in PDB entry 9EV8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	45	first strand
Strand 2	A	166	174	anti-parallel
Strand 3	A	63	73	anti-parallel
Strand 4	A	131	136	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	122	first strand
Strand 2	A	77	82	anti-parallel
Strand 3	A	141	149	anti-parallel
Strand 4	A	51	58	anti-parallel
Strand 5	A	193	194	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	211	first strand
Strand 2	A	299	306	anti-parallel
Strand 3	A	231	237	anti-parallel
Strand 4	A	270	274	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	222	first strand
Strand 2	A	282	287	anti-parallel
Strand 3	A	246	251	anti-parallel
Strand 4	A	256	259	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	379	first strand
Strand 2	A	407	415	anti-parallel
Strand 3	A	420	432	anti-parallel
Strand 4	A	348	360	anti-parallel
Strand 5	A	328	343	anti-parallel
Strand 6	A	461	466	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	397	399	first strand
Strand 2	A	445	454	anti-parallel
Strand 3	A	501	513	anti-parallel
Strand 4	A	482	495	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	45	first strand
Strand 2	B	166	174	anti-parallel
Strand 3	B	63	73	anti-parallel
Strand 4	B	131	136	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	122	first strand
Strand 2	B	77	82	anti-parallel
Strand 3	B	141	149	anti-parallel
Strand 4	B	51	58	anti-parallel
Strand 5	B	193	194	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	204	211	first strand
Strand 2	B	299	306	anti-parallel
Strand 3	B	231	237	anti-parallel
Strand 4	B	270	274	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	222	first strand
Strand 2	B	282	287	anti-parallel
Strand 3	B	246	251	anti-parallel
Strand 4	B	256	259	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	379	first strand
Strand 2	B	407	415	anti-parallel
Strand 3	B	420	432	anti-parallel
Strand 4	B	348	360	anti-parallel
Strand 5	B	328	343	anti-parallel
Strand 6	B	461	466	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	397	399	first strand
Strand 2	B	445	454	anti-parallel
Strand 3	B	501	513	anti-parallel
Strand 4	B	482	495	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	45	first strand
Strand 2	C	166	174	anti-parallel
Strand 3	C	63	73	anti-parallel
Strand 4	C	131	136	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	122	first strand
Strand 2	C	77	82	anti-parallel
Strand 3	C	141	149	anti-parallel
Strand 4	C	51	58	anti-parallel
Strand 5	C	193	194	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	211	first strand
Strand 2	C	299	306	anti-parallel
Strand 3	C	231	237	anti-parallel
Strand 4	C	270	274	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	218	222	first strand
Strand 2	C	282	287	anti-parallel
Strand 3	C	246	251	anti-parallel
Strand 4	C	256	259	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	379	first strand
Strand 2	C	407	415	anti-parallel
Strand 3	C	420	432	anti-parallel
Strand 4	C	348	360	anti-parallel
Strand 5	C	328	343	anti-parallel
Strand 6	C	461	466	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	397	399	first strand
Strand 2	C	445	454	anti-parallel
Strand 3	C	501	513	anti-parallel
Strand 4	C	482	495	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	45	first strand
Strand 2	D	166	174	anti-parallel
Strand 3	D	63	73	anti-parallel
Strand 4	D	131	136	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	122	first strand
Strand 2	D	77	82	anti-parallel
Strand 3	D	141	149	anti-parallel
Strand 4	D	51	58	anti-parallel
Strand 5	D	193	194	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	204	211	first strand
Strand 2	D	299	306	anti-parallel
Strand 3	D	231	237	anti-parallel
Strand 4	D	270	274	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	218	222	first strand
Strand 2	D	282	287	anti-parallel
Strand 3	D	246	251	anti-parallel
Strand 4	D	256	259	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	379	first strand
Strand 2	D	407	415	anti-parallel
Strand 3	D	420	432	anti-parallel
Strand 4	D	348	360	anti-parallel
Strand 5	D	328	343	anti-parallel
Strand 6	D	461	466	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	397	399	first strand
Strand 2	D	445	454	anti-parallel
Strand 3	D	501	513	anti-parallel
Strand 4	D	482	495	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	45	first strand
Strand 2	E	166	174	anti-parallel
Strand 3	E	63	73	anti-parallel
Strand 4	E	131	136	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	122	first strand
Strand 2	E	77	82	anti-parallel
Strand 3	E	141	149	anti-parallel
Strand 4	E	51	58	anti-parallel
Strand 5	E	193	194	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	204	211	first strand
Strand 2	E	299	306	anti-parallel
Strand 3	E	231	237	anti-parallel
Strand 4	E	270	274	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	218	222	first strand
Strand 2	E	282	287	anti-parallel
Strand 3	E	246	251	anti-parallel
Strand 4	E	256	259	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	376	379	first strand
Strand 2	E	407	415	anti-parallel
Strand 3	E	420	432	anti-parallel
Strand 4	E	348	360	anti-parallel
Strand 5	E	328	343	anti-parallel
Strand 6	E	461	466	parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	397	399	first strand
Strand 2	E	445	454	anti-parallel
Strand 3	E	501	513	anti-parallel
Strand 4	E	482	495	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EV8

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EV8