Analysis of interatomic Contacts of Structural Units in PDB entry:
9EVF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EVF entry

There are 3 chains in PDB entry 9EVF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 456
B	MET 1	PHE 105
C	MET 1	THR 82

There are 43 helices in PDB entry 9EVF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	29	Right-handed alpha
Helix 2	AA2	A	45	51	Right-handed alpha
Helix 3	AA3	A	56	75	Right-handed alpha
Helix 4	AA4	A	88	107	Right-handed alpha
Helix 5	AA5	A	120	130	Right-handed alpha
Helix 6	AA6	A	143	150	Right-handed alpha
Helix 7	AA7	A	158	168	Right-handed alpha
Helix 8	AA8	A	179	191	Right-handed alpha
Helix 9	AA9	A	194	206	Right-handed alpha
Helix 10	AB1	A	207	212	Right-handed 310
Helix 11	AB2	A	242	252	Right-handed alpha
Helix 12	AB3	A	316	322	Right-handed alpha
Helix 13	AB4	A	322	338	Right-handed alpha
Helix 14	AB5	A	358	362	Right-handed 310
Helix 15	AB6	A	381	398	Right-handed alpha
Helix 16	AB7	A	437	441	Right-handed 310
Helix 17	AB8	B	5	8	Right-handed alpha
Helix 18	AB9	B	30	41	Right-handed alpha
Helix 19	AC1	B	44	53	Right-handed alpha
Helix 20	AC2	B	55	59	Right-handed 310
Helix 21	AC3	B	66	68	Right-handed 310
Helix 22	AC4	B	95	100	Right-handed 310
Helix 23	AC5	C	19	29	Right-handed alpha
Helix 24	AC6	C	45	51	Right-handed alpha
Helix 25	AC7	C	56	75	Right-handed alpha
Helix 26	AC8	C	88	107	Right-handed alpha
Helix 27	AC9	C	120	130	Right-handed alpha
Helix 28	AD1	C	143	150	Right-handed alpha
Helix 29	AD2	C	158	168	Right-handed alpha
Helix 30	AD3	C	179	191	Right-handed alpha
Helix 31	AD4	C	194	206	Right-handed alpha
Helix 32	AD5	C	207	212	Right-handed 310
Helix 33	AD6	C	242	252	Right-handed alpha
Helix 34	AD7	C	316	322	Right-handed alpha
Helix 35	AD8	C	322	339	Right-handed alpha
Helix 36	AD9	C	358	362	Right-handed 310
Helix 37	AE1	C	381	398	Right-handed alpha
Helix 38	AE2	C	437	441	Right-handed 310
Helix 39	AE3	D	30	41	Right-handed alpha
Helix 40	AE4	D	44	53	Right-handed alpha
Helix 41	AE5	D	55	59	Right-handed 310
Helix 42	AE6	D	66	68	Right-handed 310
Helix 43	AE7	D	95	100	Right-handed 310

There are 12 sheets in PDB entry 9EVF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	277	first strand
Strand 2	A	281	285	anti-parallel
Strand 3	A	230	234	anti-parallel
Strand 4	A	221	225	anti-parallel
Strand 5	A	5	9	anti-parallel
Strand 6	A	33	39	parallel
Strand 7	A	78	85	parallel
Strand 8	A	172	175	parallel
Strand 9	A	110	115	parallel
Strand 10	A	445	449	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	135	first strand
Strand 2	A	419	435	anti-parallel
Strand 3	A	295	314	anti-parallel
Strand 4	A	154	155	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	135	first strand
Strand 2	A	419	435	anti-parallel
Strand 3	A	295	314	anti-parallel
Strand 4	A	371	379	anti-parallel
Strand 5	A	346	352	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	262	first strand
Strand 2	A	265	268	anti-parallel
Strand 3	A	288	291	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	4	first strand
Strand 2	B	102	103	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	16	first strand
Strand 2	B	21	28	anti-parallel
Strand 3	B	70	76	anti-parallel
Strand 4	B	61	65	anti-parallel

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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	277	first strand
Strand 2	C	281	285	anti-parallel
Strand 3	C	230	234	anti-parallel
Strand 4	C	221	225	anti-parallel
Strand 5	C	5	9	anti-parallel
Strand 6	C	33	39	parallel
Strand 7	C	78	85	parallel
Strand 8	C	172	175	parallel
Strand 9	C	110	115	parallel
Strand 10	C	445	450	anti-parallel
Strand 11	C	453	455	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	135	first strand
Strand 2	C	419	435	anti-parallel
Strand 3	C	295	314	anti-parallel
Strand 4	C	154	155	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	135	first strand
Strand 2	C	419	435	anti-parallel
Strand 3	C	295	314	anti-parallel
Strand 4	C	371	379	anti-parallel
Strand 5	C	346	352	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	262	first strand
Strand 2	C	265	268	anti-parallel
Strand 3	C	288	291	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	4	first strand
Strand 2	D	102	104	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	16	first strand
Strand 2	D	21	28	anti-parallel
Strand 3	D	70	76	anti-parallel
Strand 4	D	61	65	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EVF

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EVF