Analysis of interatomic Contacts of Structural Units in PDB entry:
9EVI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EVI entry

There are 2 chains in PDB entry 9EVI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 19PRO 342
B
 LEU 26PRO 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 34 helices in PDB entry 9EVI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 44Right-handed alpha
Helix 2
AA2
A
68 74Right-handed alpha
Helix 3
AA3
A
76 83Right-handed alpha
Helix 4
AA4
A
100 119Right-handed alpha
Helix 5
AA5
A
130 143Right-handed alpha
Helix 6
AA6
A
144 148Right-handed 310
Helix 7
AA7
A
176 182Right-handed alpha
Helix 8
AA8
A
186 195Right-handed alpha
Helix 9
AA9
A
237 242Right-handed alpha
Helix 10
AB1
A
250 255Right-handed alpha
Helix 11
AB2
A
255 268Right-handed alpha
Helix 12
AB3
A
274 278Right-handed 310
Helix 13
AB4
A
279 283Right-handed 310
Helix 14
AB5
A
292 301Right-handed alpha
Helix 15
AB6
A
303 313Right-handed alpha
Helix 16
AB7
A
326 330Right-handed 310
Helix 17
AB8
B
37 44Right-handed alpha
Helix 18
AB9
B
68 74Right-handed alpha
Helix 19
AC1
B
76 84Right-handed alpha
Helix 20
AC2
B
100 119Right-handed alpha
Helix 21
AC3
B
130 143Right-handed alpha
Helix 22
AC4
B
144 147Right-handed 310
Helix 23
AC5
B
163 167Right-handed 310
Helix 24
AC6
B
168 172Right-handed 310
Helix 25
AC7
B
176 182Right-handed alpha
Helix 26
AC8
B
186 195Right-handed alpha
Helix 27
AC9
B
237 242Right-handed alpha
Helix 28
AD1
B
250 255Right-handed alpha
Helix 29
AD2
B
255 268Right-handed alpha
Helix 30
AD3
B
274 278Right-handed 310
Helix 31
AD4
B
279 283Right-handed 310
Helix 32
AD5
B
292 301Right-handed alpha
Helix 33
AD6
B
303 313Right-handed alpha
Helix 34
AD7
B
326 330Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 9EVI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 47first strand
Strand 2
A
87 91anti-parallel
Strand 3
A
58 62parallel
Strand 4
A
124 129parallel
Strand 5
A
150 156parallel
Strand 6
A
204 208parallel
Strand 7
A
233 236parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 335first strand
Strand 2
A
338 339anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 47first strand
Strand 2
B
87 91anti-parallel
Strand 3
B
58 62parallel
Strand 4
B
124 129parallel
Strand 5
B
150 156parallel
Strand 6
B
204 208parallel
Strand 7
B
233 236parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 335first strand
Strand 2
B
338 339anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il