Analysis of interatomic Contacts of Structural Units in PDB entry:
9EVV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EVV entry

There are 8 chains in PDB entry 9EVV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 5	ASP 128
A	THR 130	LEU 579
B	ALA 5	ASP 128
B	THR 130	LEU 579
C	ALA 5	ASP 128
C	THR 130	LEU 579
D	ALA 5	ASP 128
D	THR 130	LEU 579

There are124 helices in PDB entry 9EVV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	18	Right-handed alpha
Helix 2	AA2	A	21	32	Right-handed alpha
Helix 3	AA3	A	33	35	Right-handed 310
Helix 4	AA4	A	37	42	Right-handed 310
Helix 5	AA5	A	57	61	Right-handed 310
Helix 6	AA6	A	62	78	Right-handed alpha
Helix 7	AA7	A	97	115	Right-handed alpha
Helix 8	AA8	A	129	140	Right-handed alpha
Helix 9	AA9	A	166	178	Right-handed alpha
Helix 10	AB1	A	182	189	Right-handed alpha
Helix 11	AB2	A	204	217	Right-handed alpha
Helix 12	AB3	A	230	251	Right-handed alpha
Helix 13	AB4	A	253	258	Right-handed alpha
Helix 14	AB5	A	259	274	Right-handed alpha
Helix 15	AB6	A	277	291	Right-handed alpha
Helix 16	AB7	A	295	304	Right-handed alpha
Helix 17	AB8	A	319	327	Right-handed alpha
Helix 18	AB9	A	327	339	Right-handed alpha
Helix 19	AC1	A	353	359	Right-handed alpha
Helix 20	AC2	A	371	375	Right-handed 310
Helix 21	AC3	A	397	401	Right-handed 310
Helix 22	AC4	A	402	405	Right-handed 310
Helix 23	AC5	A	417	425	Right-handed alpha
Helix 24	AC6	A	460	465	Right-handed alpha
Helix 25	AC7	A	494	498	Right-handed 310
Helix 26	AC8	A	499	504	Right-handed 310
Helix 27	AC9	A	524	534	Right-handed alpha
Helix 28	AD1	A	544	554	Right-handed alpha
Helix 29	AD2	A	556	560	Right-handed 310
Helix 30	AD3	A	563	567	Right-handed 310
Helix 31	AD4	B	13	18	Right-handed alpha
Helix 32	AD5	B	21	32	Right-handed alpha
Helix 33	AD6	B	33	35	Right-handed 310
Helix 34	AD7	B	37	42	Right-handed 310
Helix 35	AD8	B	57	61	Right-handed 310
Helix 36	AD9	B	62	78	Right-handed alpha
Helix 37	AE1	B	97	100	Right-handed 310
Helix 38	AE2	B	101	115	Right-handed alpha
Helix 39	AE3	B	129	140	Right-handed alpha
Helix 40	AE4	B	166	178	Right-handed alpha
Helix 41	AE5	B	182	194	Right-handed alpha
Helix 42	AE6	B	204	217	Right-handed alpha
Helix 43	AE7	B	230	251	Right-handed alpha
Helix 44	AE8	B	253	258	Right-handed alpha
Helix 45	AE9	B	259	274	Right-handed alpha
Helix 46	AF1	B	277	291	Right-handed alpha
Helix 47	AF2	B	295	304	Right-handed alpha
Helix 48	AF3	B	319	327	Right-handed alpha
Helix 49	AF4	B	327	339	Right-handed alpha
Helix 50	AF5	B	353	359	Right-handed alpha
Helix 51	AF6	B	371	375	Right-handed 310
Helix 52	AF7	B	397	401	Right-handed 310
Helix 53	AF8	B	402	405	Right-handed 310
Helix 54	AF9	B	417	425	Right-handed alpha
Helix 55	AG1	B	460	466	Right-handed alpha
Helix 56	AG2	B	494	498	Right-handed 310
Helix 57	AG3	B	499	504	Right-handed 310
Helix 58	AG4	B	524	534	Right-handed alpha
Helix 59	AG5	B	544	554	Right-handed alpha
Helix 60	AG6	B	556	560	Right-handed 310
Helix 61	AG7	B	563	567	Right-handed 310
Helix 62	AG8	C	13	18	Right-handed alpha
Helix 63	AG9	C	21	32	Right-handed alpha
Helix 64	AH1	C	33	35	Right-handed 310
Helix 65	AH2	C	37	42	Right-handed 310
Helix 66	AH3	C	57	61	Right-handed 310
Helix 67	AH4	C	62	77	Right-handed alpha
Helix 68	AH5	C	98	115	Right-handed alpha
Helix 69	AH6	C	129	140	Right-handed alpha
Helix 70	AH7	C	166	178	Right-handed alpha
Helix 71	AH8	C	182	189	Right-handed alpha
Helix 72	AH9	C	204	216	Right-handed alpha
Helix 73	AI1	C	230	251	Right-handed alpha
Helix 74	AI2	C	253	258	Right-handed alpha
Helix 75	AI3	C	259	274	Right-handed alpha
Helix 76	AI4	C	277	291	Right-handed alpha
Helix 77	AI5	C	295	303	Right-handed alpha
Helix 78	AI6	C	319	327	Right-handed alpha
Helix 79	AI7	C	327	339	Right-handed alpha
Helix 80	AI8	C	353	359	Right-handed alpha
Helix 81	AI9	C	371	375	Right-handed 310
Helix 82	AJ1	C	397	401	Right-handed 310
Helix 83	AJ2	C	402	405	Right-handed 310
Helix 84	AJ3	C	417	425	Right-handed alpha
Helix 85	AJ4	C	460	465	Right-handed alpha
Helix 86	AJ5	C	494	498	Right-handed 310
Helix 87	AJ6	C	499	504	Right-handed 310
Helix 88	AJ7	C	515	517	Right-handed 310
Helix 89	AJ8	C	524	533	Right-handed alpha
Helix 90	AJ9	C	544	554	Right-handed alpha
Helix 91	AK1	C	556	560	Right-handed 310
Helix 92	AK2	C	563	567	Right-handed 310
Helix 93	AK3	D	13	18	Right-handed alpha
Helix 94	AK4	D	21	32	Right-handed alpha
Helix 95	AK5	D	33	35	Right-handed 310
Helix 96	AK6	D	37	42	Right-handed 310
Helix 97	AK7	D	57	61	Right-handed 310
Helix 98	AK8	D	62	78	Right-handed alpha
Helix 99	AK9	D	97	100	Right-handed 310
Helix 100	AL1	D	101	115	Right-handed alpha
Helix 101	AL2	D	129	140	Right-handed alpha
Helix 102	AL3	D	166	178	Right-handed alpha
Helix 103	AL4	D	182	190	Right-handed alpha
Helix 104	AL5	D	191	193	Right-handed 310
Helix 105	AL6	D	204	217	Right-handed alpha
Helix 106	AL7	D	230	251	Right-handed alpha
Helix 107	AL8	D	253	258	Right-handed alpha
Helix 108	AL9	D	259	274	Right-handed alpha
Helix 109	AM1	D	277	291	Right-handed alpha
Helix 110	AM2	D	295	304	Right-handed alpha
Helix 111	AM3	D	319	326	Right-handed alpha
Helix 112	AM4	D	328	339	Right-handed alpha
Helix 113	AM5	D	353	359	Right-handed alpha
Helix 114	AM6	D	371	375	Right-handed 310
Helix 115	AM7	D	397	401	Right-handed 310
Helix 116	AM8	D	402	405	Right-handed 310
Helix 117	AM9	D	417	425	Right-handed alpha
Helix 118	AN1	D	460	465	Right-handed alpha
Helix 119	AN2	D	494	498	Right-handed 310
Helix 120	AN3	D	499	504	Right-handed 310
Helix 121	AN4	D	524	534	Right-handed alpha
Helix 122	AN5	D	544	554	Right-handed alpha
Helix 123	AN6	D	556	560	Right-handed 310
Helix 124	AN7	D	563	567	Right-handed 310

There are 14 sheets in PDB entry 9EVV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	85	first strand
Strand 2	A	46	51	parallel
Strand 3	A	120	125	parallel
Strand 4	A	145	149	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	158	first strand
Strand 2	A	161	163	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	387	first strand
Strand 2	A	390	396	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	487	488	first strand
Strand 2	A	472	475	parallel
Strand 3	A	437	440	parallel
Strand 4	A	407	415	parallel
Strand 5	A	509	513	anti-parallel
Strand 6	A	518	521	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	85	first strand
Strand 2	B	46	51	parallel
Strand 3	B	120	125	parallel
Strand 4	B	145	149	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	158	first strand
Strand 2	B	161	163	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	385	first strand
Strand 2	B	393	396	anti-parallel
Strand 3	B	487	492	anti-parallel
Strand 4	B	473	475	parallel
Strand 5	B	437	440	parallel
Strand 6	B	407	415	parallel
Strand 7	B	509	513	anti-parallel
Strand 8	B	518	522	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	85	first strand
Strand 2	C	46	51	parallel
Strand 3	C	120	125	parallel
Strand 4	C	145	149	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	158	first strand
Strand 2	C	161	163	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	383	385	first strand
Strand 2	C	394	396	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	487	488	first strand
Strand 2	C	472	475	parallel
Strand 3	C	437	440	parallel
Strand 4	C	407	415	parallel
Strand 5	C	509	513	anti-parallel
Strand 6	C	518	521	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	80	85	first strand
Strand 2	D	46	51	parallel
Strand 3	D	120	125	parallel
Strand 4	D	145	149	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	157	first strand
Strand 2	D	162	163	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	383	387	first strand
Strand 2	D	390	396	anti-parallel
Strand 3	D	487	492	anti-parallel
Strand 4	D	473	475	parallel
Strand 5	D	437	440	parallel
Strand 6	D	407	415	parallel
Strand 7	D	509	513	anti-parallel
Strand 8	D	518	521	anti-parallel
Strand 9	D	383	387	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EVV

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EVV