Analysis of interatomic Contacts of Structural Units in PDB entry:
9EWB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EWB entry

There are 4 chains in PDB entry 9EWB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 250TRP 570
F
 C 1 G 11
G
 C 1 C 6
H
 G 1 G 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9EWB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
253 270Right-handed alpha
Helix 2
AA2
A
272 288Right-handed alpha
Helix 3
AA3
A
295 301Right-handed alpha
Helix 4
AA4
A
306 320Right-handed alpha
Helix 5
AA5
A
322 328Right-handed 310
Helix 6
AA6
A
331 340Right-handed alpha
Helix 7
AA7
A
345 355Right-handed alpha
Helix 8
AA8
A
359 367Right-handed alpha
Helix 9
AA9
A
370 379Right-handed alpha
Helix 10
AB1
A
379 384Right-handed alpha
Helix 11
AB2
A
389 404Right-handed alpha
Helix 12
AB3
A
438 441Right-handed 310
Helix 13
AB4
A
442 454Right-handed alpha
Helix 14
AB5
A
490 492Right-handed 310
Helix 15
AB6
A
493 503Right-handed alpha
Helix 16
AB7
A
504 518Right-handed alpha
Helix 17
AB8
A
550 558Right-handed alpha
Helix 18
AB9
A
564 568Right-handed 310
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There are 4 sheets in PDB entry 9EWB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
424 425anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 414first strand
Strand 2
A
428 433anti-parallel
Strand 3
A
482 488parallel
Strand 4
A
467 472anti-parallel
Strand 5
A
457 463anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 522first strand
Strand 2
A
527 529anti-parallel
Strand 3
A
544 546anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 533first strand
Strand 2
A
539 541anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il