Analysis of interatomic Contacts of Structural Units in PDB entry:
9EWC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EWC entry

There are 8 chains in PDB entry 9EWC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 250TRP 575
C
 THR 250TRP 575
E
 C 1 G 11
F
 C 1 G 11
G
 C 1 C 6
H
 G 1 G 4
I
 C 1 C 6
J
 G 1 G 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 9EWC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
253 270Right-handed alpha
Helix 2
AA2
A
272 287Right-handed alpha
Helix 3
AA3
A
295 301Right-handed alpha
Helix 4
AA4
A
306 319Right-handed alpha
Helix 5
AA5
A
322 328Right-handed 310
Helix 6
AA6
A
330 340Right-handed alpha
Helix 7
AA7
A
345 355Right-handed alpha
Helix 8
AA8
A
359 366Right-handed alpha
Helix 9
AA9
A
370 379Right-handed alpha
Helix 10
AB1
A
379 385Right-handed alpha
Helix 11
AB2
A
389 407Right-handed alpha
Helix 12
AB3
A
416 421Right-handed alpha
Helix 13
AB4
A
443 455Right-handed alpha
Helix 14
AB5
A
498 506Right-handed alpha
Helix 15
AB6
A
509 523Right-handed alpha
Helix 16
AB7
A
555 563Right-handed alpha
Helix 17
AB8
A
569 573Right-handed 310
Helix 18
AB9
C
253 270Right-handed alpha
Helix 19
AC1
C
272 288Right-handed alpha
Helix 20
AC2
C
295 301Right-handed alpha
Helix 21
AC3
C
306 319Right-handed alpha
Helix 22
AC4
C
331 340Right-handed alpha
Helix 23
AC5
C
345 354Right-handed alpha
Helix 24
AC6
C
355 357Right-handed 310
Helix 25
AC7
C
359 366Right-handed alpha
Helix 26
AC8
C
370 379Right-handed alpha
Helix 27
AC9
C
379 385Right-handed alpha
Helix 28
AD1
C
388 407Right-handed alpha
Helix 29
AD2
C
416 421Right-handed alpha
Helix 30
AD3
C
438 442Right-handed 310
Helix 31
AD4
C
443 454Right-handed alpha
Helix 32
AD5
C
495 506Right-handed alpha
Helix 33
AD6
C
509 524Right-handed alpha
Helix 34
AD7
C
555 563Right-handed alpha
Helix 35
AD8
C
569 573Right-handed 310
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There are 5 sheets in PDB entry 9EWC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
424 425anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 415first strand
Strand 2
A
428 433anti-parallel
Strand 3
A
487 493parallel
Strand 4
A
472 477anti-parallel
Strand 5
A
457 463anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
532 534anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
411 415first strand
Strand 2
C
428 433anti-parallel
Strand 3
C
487 493parallel
Strand 4
C
474 477anti-parallel
Strand 5
C
457 462anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
525 527first strand
Strand 2
C
532 534anti-parallel
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