Analysis of interatomic Contacts of Structural Units in PDB entry:
9EWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EWY entry

There is 1 chain in PDB entry 9EWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 8LEU 1061
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 32 helices in PDB entry 9EWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 20Right-handed alpha
Helix 2
AA2
A
22 37Right-handed alpha
Helix 3
AA3
A
44 55Right-handed alpha
Helix 4
AA4
A
61 72Right-handed alpha
Helix 5
AA5
A
93 106Right-handed alpha
Helix 6
AA6
A
128 138Right-handed alpha
Helix 7
AA7
A
139 144Right-handed alpha
Helix 8
AA8
A
157 172Right-handed alpha
Helix 9
AA9
A
203 208Right-handed alpha
Helix 10
AB1
A
249 254Right-handed alpha
Helix 11
AB2
A
266 277Right-handed alpha
Helix 12
AB3
A
299 306Right-handed alpha
Helix 13
AB4
A
315 320Right-handed alpha
Helix 14
AB5
A
326 342Right-handed alpha
Helix 15
AB6
A
392 395Right-handed 310
Helix 16
AB7
A
399 403Right-handed 310
Helix 17
AB8
A
404 425Right-handed alpha
Helix 18
AB9
A
428 441Right-handed alpha
Helix 19
AC1
A
442 446Right-handed 310
Helix 20
AC2
A
454 458Right-handed 310
Helix 21
AC3
A
461 465Right-handed 310
Helix 22
AC4
A
475 481Right-handed 310
Helix 23
AC5
A
509 523Right-handed alpha
Helix 24
AC6
A
540 551Right-handed alpha
Helix 25
AC7
A
556 562Right-handed alpha
Helix 26
AC8
A
566 580Right-handed alpha
Helix 27
AC9
A
587 594Right-handed alpha
Helix 28
AD1
A
596 611Right-handed alpha
Helix 29
AD2
A
631 645Right-handed alpha
Helix 30
AD3
A
908 959Right-handed alpha
Helix 31
AD4
A
963 1015Right-handed alpha
Helix 32
AD5
A
1023 1061Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 9EWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
109 114parallel
Strand 3
A
86 90parallel
Strand 4
A
213 216parallel
Strand 5
A
384 390parallel
Strand 6
A
376 381anti-parallel
Strand 7
A
483 485parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
154 156anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 185first strand
Strand 2
A
195 199anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 232first strand
Strand 2
A
369 372anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 261first strand
Strand 2
A
281 288anti-parallel
Strand 3
A
291 298anti-parallel
Strand 4
A
238 245anti-parallel
Strand 5
A
361 365anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
709 712first strand
Strand 2
A
715 718anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
736 739first strand
Strand 2
A
744 747anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il