Analysis of interatomic Contacts of Structural Units in PDB entry:
9EXJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EXJ entry

There is 1 chain in PDB entry 9EXJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 26CYS 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 9EXJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
36 40Right-handed 310
Helix 2
AA2
A
232 236Right-handed 310
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There are 2 sheets in PDB entry 9EXJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
28 31first strand
Strand 2
A
75 81anti-parallel
Strand 3
A
137 140anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
69 71first strand
Strand 2
A
166 175parallel
Strand 3
A
148 158anti-parallel
Strand 4
A
89 96anti-parallel
Strand 5
A
108 113anti-parallel
Strand 6
A
227 228parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il