Analysis of interatomic Contacts of Structural Units in PDB entry:
9EYI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EYI entry

There are 5 chains in PDB entry 9EYI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 4ASN 505
B
 PHE 4LEU 506
C
 VAL 203LEU 504
D
 A 1 A 3
E
 A 1 A 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 9EYI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 13Right-handed alpha
Helix 2
AA2
A
19 29Right-handed alpha
Helix 3
AA3
A
36 46Right-handed alpha
Helix 4
AA4
A
49 64Right-handed alpha
Helix 5
AA5
A
66 75Right-handed alpha
Helix 6
AA6
A
77 87Right-handed alpha
Helix 7
AA7
A
131 139Right-handed alpha
Helix 8
AA8
A
155 164Right-handed alpha
Helix 9
AA9
A
191 197Right-handed alpha
Helix 10
AB1
A
208 218Right-handed alpha
Helix 11
AB2
A
231 250Right-handed alpha
Helix 12
AB3
A
254 263Right-handed alpha
Helix 13
AB4
A
280 291Right-handed alpha
Helix 14
AB5
A
291 303Right-handed alpha
Helix 15
AB6
A
317 328Right-handed alpha
Helix 16
AB7
A
356 362Right-handed 310
Helix 17
AB8
A
366 370Right-handed 310
Helix 18
AB9
A
398 409Right-handed alpha
Helix 19
AC1
A
433 451Right-handed alpha
Helix 20
AC2
A
463 475Right-handed alpha
Helix 21
AC3
A
501 503Right-handed 310
Helix 22
AC4
B
5 13Right-handed alpha
Helix 23
AC5
B
16 30Right-handed alpha
Helix 24
AC6
B
37 46Right-handed alpha
Helix 25
AC7
B
49 61Right-handed alpha
Helix 26
AC8
B
67 75Right-handed alpha
Helix 27
AC9
B
78 83Right-handed alpha
Helix 28
AD1
B
131 139Right-handed alpha
Helix 29
AD2
B
155 165Right-handed alpha
Helix 30
AD3
B
208 218Right-handed alpha
Helix 31
AD4
B
231 250Right-handed alpha
Helix 32
AD5
B
254 263Right-handed alpha
Helix 33
AD6
B
265 269Right-handed alpha
Helix 34
AD7
B
280 291Right-handed alpha
Helix 35
AD8
B
291 303Right-handed alpha
Helix 36
AD9
B
316 328Right-handed alpha
Helix 37
AE1
B
357 362Right-handed 310
Helix 38
AE2
B
398 409Right-handed alpha
Helix 39
AE3
B
433 451Right-handed alpha
Helix 40
AE4
B
463 475Right-handed alpha
Helix 41
AE5
B
501 505Right-handed 310
Helix 42
AE6
C
208 217Right-handed alpha
Helix 43
AE7
C
231 250Right-handed alpha
Helix 44
AE8
C
254 259Right-handed alpha
Helix 45
AE9
C
280 291Right-handed alpha
Helix 46
AF1
C
291 303Right-handed alpha
Helix 47
AF2
C
316 328Right-handed alpha
Helix 48
AF3
C
398 409Right-handed alpha
Helix 49
AF4
C
433 451Right-handed alpha
Helix 50
AF5
C
463 474Right-handed alpha
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There are 13 sheets in PDB entry 9EYI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 95first strand
Strand 2
A
105 110anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
141 144anti-parallel
Strand 3
A
121 122parallel
Strand 4
A
129 130anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 176first strand
Strand 2
A
202 203parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
186 187anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 274first strand
Strand 2
A
220 230parallel
Strand 3
A
307 313parallel
Strand 4
A
333 339parallel
Strand 5
A
344 350anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 378first strand
Strand 2
A
415 420anti-parallel
Strand 3
A
386 392parallel
Strand 4
A
455 461parallel
Strand 5
A
480 485parallel
Strand 6
A
494 499anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 94first strand
Strand 2
B
106 112anti-parallel
Strand 3
B
142 146anti-parallel
Strand 4
B
121 122parallel
Strand 5
B
129 130anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 176first strand
Strand 2
B
202 203parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 181first strand
Strand 2
B
185 187anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 271first strand
Strand 2
B
220 227parallel
Strand 3
B
307 313parallel
Strand 4
B
333 337parallel
Strand 5
B
346 350anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 378first strand
Strand 2
B
415 420anti-parallel
Strand 3
B
386 392parallel
Strand 4
B
455 461parallel
Strand 5
B
480 485parallel
Strand 6
B
494 499anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
270 273first strand
Strand 2
C
220 229parallel
Strand 3
C
307 313parallel
Strand 4
C
333 339parallel
Strand 5
C
344 349anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
373 379first strand
Strand 2
C
414 420anti-parallel
Strand 3
C
386 392parallel
Strand 4
C
455 461parallel
Strand 5
C
480 485parallel
Strand 6
C
494 499anti-parallel
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