Analysis of interatomic Contacts of Structural Units in PDB entry:
9EYK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EYK entry

There are 5 chains in PDB entry 9EYK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 90ASN 505
B
 SER 154LEU 504
C
 THR 220LYS 502
D
 A 1 A 3
E
 A 1 A 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9EYK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
131 139Right-handed alpha
Helix 2
AA2
A
155 164Right-handed alpha
Helix 3
AA3
A
208 217Right-handed alpha
Helix 4
AA4
A
231 250Right-handed alpha
Helix 5
AA5
A
254 262Right-handed alpha
Helix 6
AA6
A
280 291Right-handed alpha
Helix 7
AA7
A
291 303Right-handed alpha
Helix 8
AA8
A
316 328Right-handed alpha
Helix 9
AA9
A
357 362Right-handed 310
Helix 10
AB1
A
366 370Right-handed 310
Helix 11
AB2
A
398 409Right-handed alpha
Helix 12
AB3
A
433 448Right-handed alpha
Helix 13
AB4
A
463 475Right-handed alpha
Helix 14
AB5
A
501 503Right-handed 310
Helix 15
AB6
B
155 163Right-handed alpha
Helix 16
AB7
B
208 218Right-handed alpha
Helix 17
AB8
B
232 250Right-handed alpha
Helix 18
AB9
B
254 263Right-handed alpha
Helix 19
AC1
B
280 291Right-handed alpha
Helix 20
AC2
B
294 303Right-handed alpha
Helix 21
AC3
B
316 328Right-handed alpha
Helix 22
AC4
B
358 362Right-handed 310
Helix 23
AC5
B
398 409Right-handed alpha
Helix 24
AC6
B
433 448Right-handed alpha
Helix 25
AC7
B
463 474Right-handed alpha
Helix 26
AC8
B
501 503Right-handed 310
Helix 27
AC9
C
231 248Right-handed alpha
Helix 28
AD1
C
254 261Right-handed alpha
Helix 29
AD2
C
280 291Right-handed alpha
Helix 30
AD3
C
291 299Right-handed alpha
Helix 31
AD4
C
318 326Right-handed alpha
Helix 32
AD5
C
398 409Right-handed alpha
Helix 33
AD6
C
433 451Right-handed alpha
Helix 34
AD7
C
463 473Right-handed alpha
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There are 8 sheets in PDB entry 9EYK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
108 109anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
121 122anti-parallel
Strand 3
A
143 144parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 274first strand
Strand 2
A
220 230parallel
Strand 3
A
307 313parallel
Strand 4
A
333 338parallel
Strand 5
A
345 350anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 378first strand
Strand 2
A
414 420anti-parallel
Strand 3
A
386 392parallel
Strand 4
A
455 461parallel
Strand 5
A
480 485parallel
Strand 6
A
494 499anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 271first strand
Strand 2
B
221 227parallel
Strand 3
B
308 313parallel
Strand 4
B
333 337parallel
Strand 5
B
346 350anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
375 378first strand
Strand 2
B
415 418anti-parallel
Strand 3
B
387 392parallel
Strand 4
B
456 461parallel
Strand 5
B
480 484parallel
Strand 6
B
495 499anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
270 273first strand
Strand 2
C
222 229parallel
Strand 3
C
309 314parallel
Strand 4
C
334 339parallel
Strand 5
C
344 349anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
414 418first strand
Strand 2
C
386 392parallel
Strand 3
C
455 461parallel
Strand 4
C
481 485parallel
Strand 5
C
494 499anti-parallel
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