Analysis of interatomic Contacts of Structural Units in PDB entry:
9EYT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EYT entry

There are 4 chains in PDB entry 9EYT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 369
E
 TYR 2LEU 7
G
 GLY 1LEU 7
M
 GLY 1LEU 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 9EYT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 18Right-handed 310
Helix 2
AA2
A
20 24Right-handed 310
Helix 3
AA3
A
133 135Right-handed 310
Helix 4
AA4
A
148 152Right-handed 310
Helix 5
AA5
A
339 347Right-handed alpha
Helix 6
AA6
A
350 362Right-handed alpha
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There are 7 sheets in PDB entry 9EYT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 13first strand
Strand 2
A
329 335anti-parallel
Strand 3
A
320 325anti-parallel
Strand 4
A
309 315anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 33first strand
Strand 2
A
36 41anti-parallel
Strand 3
A
48 53anti-parallel
Strand 4
A
59 64anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 72first strand
Strand 2
A
78 83anti-parallel
Strand 3
A
87 92anti-parallel
Strand 4
A
97 103anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 113first strand
Strand 2
A
118 123anti-parallel
Strand 3
A
126 131anti-parallel
Strand 4
A
142 146anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 161first strand
Strand 2
A
167 176anti-parallel
Strand 3
A
179 188anti-parallel
Strand 4
A
193 198anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 207first strand
Strand 2
A
217 225anti-parallel
Strand 3
A
232 239anti-parallel
Strand 4
A
252 256anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 273first strand
Strand 2
A
278 283anti-parallel
Strand 3
A
287 292anti-parallel
Strand 4
A
298 303anti-parallel
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