Analysis of interatomic Contacts of Structural Units in PDB entry:
9EZY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EZY entry

There are 5 chains in PDB entry 9EZY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 3	SER 1190
B	GLN 11	SER 687
C	A 1	A 15
D	T 1	T 19
E	A 1	T 19

There are 85 helices in PDB entry 9EZY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	9	Right-handed 310
Helix 2	AA2	A	20	38	Right-handed alpha
Helix 3	AA3	A	54	77	Right-handed alpha
Helix 4	AA4	A	94	112	Right-handed alpha
Helix 5	AA5	A	121	131	Right-handed alpha
Helix 6	AA6	A	137	145	Right-handed alpha
Helix 7	AA7	A	146	157	Right-handed alpha
Helix 8	AA8	A	158	161	Right-handed 310
Helix 9	AA9	A	162	177	Right-handed alpha
Helix 10	AB1	A	181	209	Right-handed alpha
Helix 11	AB2	A	216	227	Right-handed alpha
Helix 12	AB3	A	227	234	Right-handed alpha
Helix 13	AB4	A	244	250	Right-handed alpha
Helix 14	AB5	A	259	264	Right-handed 310
Helix 15	AB6	A	276	286	Right-handed alpha
Helix 16	AB7	A	293	307	Right-handed alpha
Helix 17	AB8	A	312	316	Right-handed 310
Helix 18	AB9	A	318	337	Right-handed alpha
Helix 19	AC1	A	402	432	Right-handed alpha
Helix 20	AC2	A	445	460	Right-handed alpha
Helix 21	AC3	A	461	463	Right-handed 310
Helix 22	AC4	A	464	475	Right-handed alpha
Helix 23	AC5	A	476	478	Right-handed 310
Helix 24	AC6	A	493	497	Right-handed 310
Helix 25	AC7	A	524	535	Right-handed alpha
Helix 26	AC8	A	556	565	Right-handed alpha
Helix 27	AC9	A	566	568	Right-handed 310
Helix 28	AD1	A	572	587	Right-handed alpha
Helix 29	AD2	A	589	593	Right-handed 310
Helix 30	AD3	A	604	615	Right-handed alpha
Helix 31	AD4	A	621	629	Right-handed alpha
Helix 32	AD5	A	633	635	Right-handed 310
Helix 33	AD6	A	636	657	Right-handed alpha
Helix 34	AD7	A	672	674	Right-handed 310
Helix 35	AD8	A	675	694	Right-handed alpha
Helix 36	AD9	A	704	711	Right-handed alpha
Helix 37	AE1	A	713	723	Right-handed alpha
Helix 38	AE2	A	747	752	Right-handed alpha
Helix 39	AE3	A	789	807	Right-handed alpha
Helix 40	AE4	A	811	824	Right-handed alpha
Helix 41	AE5	A	827	837	Right-handed alpha
Helix 42	AE6	A	838	856	Right-handed alpha
Helix 43	AE7	A	872	880	Right-handed alpha
Helix 44	AE8	A	884	888	Right-handed 310
Helix 45	AE9	A	889	900	Right-handed alpha
Helix 46	AF1	A	910	938	Right-handed alpha
Helix 47	AF2	A	942	960	Right-handed alpha
Helix 48	AF3	A	970	972	Right-handed 310
Helix 49	AF4	A	992	996	Right-handed 310
Helix 50	AF5	A	1000	1002	Right-handed 310
Helix 51	AF6	A	1014	1019	Right-handed alpha
Helix 52	AF7	A	1023	1032	Right-handed alpha
Helix 53	AF8	A	1045	1052	Right-handed alpha
Helix 54	AF9	A	1052	1068	Right-handed alpha
Helix 55	AG1	A	1077	1081	Right-handed 310
Helix 56	AG2	A	1102	1106	Right-handed 310
Helix 57	AG3	A	1114	1127	Right-handed alpha
Helix 58	AG4	A	1176	1190	Right-handed alpha
Helix 59	AG5	B	24	31	Right-handed alpha
Helix 60	AG6	B	46	62	Right-handed alpha
Helix 61	AG7	B	100	104	Right-handed 310
Helix 62	AG8	B	105	121	Right-handed alpha
Helix 63	AG9	B	165	168	Right-handed 310
Helix 64	AH1	B	195	199	Right-handed alpha
Helix 65	AH2	B	242	247	Right-handed alpha
Helix 66	AH3	B	249	266	Right-handed alpha
Helix 67	AH4	B	285	301	Right-handed alpha
Helix 68	AH5	B	315	329	Right-handed alpha
Helix 69	AH6	B	351	355	Right-handed 310
Helix 70	AH7	B	357	360	Right-handed 310
Helix 71	AH8	B	361	370	Right-handed alpha
Helix 72	AH9	B	380	384	Right-handed 310
Helix 73	AI1	B	391	411	Right-handed alpha
Helix 74	AI2	B	436	441	Right-handed 310
Helix 75	AI3	B	462	474	Right-handed alpha
Helix 76	AI4	B	477	482	Right-handed alpha
Helix 77	AI5	B	511	527	Right-handed alpha
Helix 78	AI6	B	531	542	Right-handed alpha
Helix 79	AI7	B	547	557	Right-handed alpha
Helix 80	AI8	B	565	572	Right-handed 310
Helix 81	AI9	B	576	589	Right-handed alpha
Helix 82	AJ1	B	605	609	Right-handed 310
Helix 83	AJ2	B	650	655	Right-handed alpha
Helix 84	AJ3	B	670	683	Right-handed alpha
Helix 85	AJ4	B	684	687	Right-handed 310

There are 19 sheets in PDB entry 9EZY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	47	first strand
Strand 2	A	538	542	parallel
Strand 3	A	268	272	parallel
Strand 4	A	88	92	parallel
Strand 5	A	239	243	parallel
Strand 6	A	132	134	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	114	first strand
Strand 2	A	117	118	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	251	252	first strand
Strand 2	A	257	258	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	292	first strand
Strand 2	A	514	521	anti-parallel
Strand 3	A	499	506	anti-parallel
Strand 4	A	354	358	anti-parallel
Strand 5	A	364	366	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	343	first strand
Strand 2	A	382	387	parallel
Strand 3	A	373	377	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	595	601	first strand
Strand 2	A	865	871	parallel
Strand 3	A	773	776	parallel
Strand 4	A	662	667	parallel
Strand 5	A	726	732	parallel
Strand 6	A	697	700	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	744	745	first strand
Strand 2	A	768	769	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	755	757	first strand
Strand 2	A	861	863	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	962	963	first strand
Strand 2	A	1042	1044	anti-parallel
Strand 3	A	974	976	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	997	998	first strand
Strand 2	A	983	986	anti-parallel
Strand 3	A	1006	1008	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1072	1074	first strand
Strand 2	A	1086	1089	anti-parallel
Strand 3	A	1097	1100	anti-parallel
Strand 4	A	1130	1134	parallel
Strand 5	A	1161	1164	parallel
Strand 6	A	1145	1147	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1137	1138	first strand
Strand 2	A	1168	1169	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	275	first strand
Strand 2	B	14	23	anti-parallel
Strand 3	B	498	509	anti-parallel
Strand 4	B	637	643	anti-parallel
Strand 5	B	619	622	anti-parallel
Strand 6	B	611	614	anti-parallel
Strand 7	B	280	282	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	275	first strand
Strand 2	B	14	23	anti-parallel
Strand 3	B	498	509	anti-parallel
Strand 4	B	489	491	anti-parallel
Strand 5	B	425	429	anti-parallel
Strand 6	B	446	452	anti-parallel
Strand 7	B	455	460	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	69	first strand
Strand 2	B	77	82	anti-parallel
Strand 3	B	32	39	anti-parallel
Strand 4	B	94	99	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	174	first strand
Strand 2	B	152	163	anti-parallel
Strand 3	B	177	180	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	174	first strand
Strand 2	B	152	163	anti-parallel
Strand 3	B	136	144	anti-parallel
Strand 4	B	211	213	anti-parallel
Strand 5	B	204	205	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	237	first strand
Strand 2	B	631	632	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	333	335	first strand
Strand 2	B	305	309	parallel
Strand 3	B	344	348	parallel
Strand 4	B	375	378	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EZY

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EZY