Analysis of interatomic Contacts of Structural Units in PDB entry:
9F03


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9F03 entry

There is 1 chain in PDB entry 9F03 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 13GLU 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 9F03. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 53Right-handed alpha
Helix 2
AA2
A
55 60Right-handed alpha
Helix 3
AA3
A
63 67Right-handed 310
Helix 4
AA4
A
69 81Right-handed alpha
Helix 5
AA5
A
98 102Right-handed 310
Helix 6
AA6
A
127 144Right-handed alpha
Helix 7
AA7
A
147 164Right-handed alpha
Helix 8
AA8
A
204 212Right-handed alpha
Helix 9
AA9
A
252 262Right-handed alpha
Helix 10
AB1
A
293 310Right-handed alpha
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There are 4 sheets in PDB entry 9F03. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
227 230anti-parallel
Strand 3
A
41 45anti-parallel
Strand 4
A
31 35anti-parallel
Strand 5
A
114 118anti-parallel
Strand 6
A
107 108anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
104 105anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
167 173anti-parallel
Strand 3
A
179 181anti-parallel
Strand 4
A
197 198anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
167 173anti-parallel
Strand 3
A
278 285anti-parallel
Strand 4
A
267 273anti-parallel
Strand 5
A
216 219anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il