Analysis of interatomic Contacts of Structural Units in PDB entry:
9F0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9F0L entry

There is 1 chain in PDB entry 9F0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 142ALA 943
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 9F0L. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
147 169Right-handed alpha
Helix 2
AA2
A
186 191Right-handed alpha
Helix 3
AA3
A
201 221Right-handed alpha
Helix 4
AA4
A
224 240Right-handed alpha
Helix 5
AA5
A
241 255Right-handed alpha
Helix 6
AA6
A
260 282Right-handed alpha
Helix 7
AA7
A
284 295Right-handed alpha
Helix 8
AA8
A
298 300Right-handed 310
Helix 9
AA9
A
301 329Right-handed alpha
Helix 10
AB1
A
333 353Right-handed alpha
Helix 11
AB2
A
355 372Right-handed alpha
Helix 12
AB3
A
374 408Right-handed alpha
Helix 13
AB4
A
409 429Right-handed alpha
Helix 14
AB5
A
429 439Right-handed alpha
Helix 15
AB6
A
440 459Right-handed alpha
Helix 16
AB7
A
473 492Right-handed alpha
Helix 17
AB8
A
494 510Right-handed alpha
Helix 18
AB9
A
514 524Right-handed alpha
Helix 19
AC1
A
527 549Right-handed alpha
Helix 20
AC2
A
556 586Right-handed alpha
Helix 21
AC3
A
593 620Right-handed alpha
Helix 22
AC4
A
621 624Right-handed 310
Helix 23
AC5
A
625 644Right-handed alpha
Helix 24
AC6
A
648 663Right-handed alpha
Helix 25
AC7
A
669 686Right-handed alpha
Helix 26
AC8
A
688 704Right-handed alpha
Helix 27
AC9
A
709 731Right-handed alpha
Helix 28
AD1
A
732 741Right-handed alpha
Helix 29
AD2
A
743 747Right-handed 310
Helix 30
AD3
A
779 811Right-handed alpha
Helix 31
AD4
A
817 850Right-handed alpha
Helix 32
AD5
A
856 875Right-handed alpha
Helix 33
AD6
A
879 885Right-handed alpha
Helix 34
AD7
A
886 901Right-handed alpha
Helix 35
AD8
A
906 922Right-handed alpha
Helix 36
AD9
A
924 940Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 9F0L.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
463 468first strand
Strand 2
A
768 775anti-parallel
Strand 3
A
758 764anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il