Analysis of interatomic Contacts of Structural Units in PDB entry:
9F14


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9F14 entry

There are 2 chains in PDB entry 9F14 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 324
B
 MET 1GLU 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9F14. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
18 26Right-handed alpha
Helix 3
AA3
A
29 45Right-handed alpha
Helix 4
AA4
A
60 89Right-handed alpha
Helix 5
AA5
A
100 107Right-handed alpha
Helix 6
AA6
A
108 119Right-handed alpha
Helix 7
AA7
A
130 140Right-handed alpha
Helix 8
AA8
A
151 156Right-handed 310
Helix 9
AA9
A
176 181Right-handed alpha
Helix 10
AB1
A
185 191Right-handed alpha
Helix 11
AB2
A
205 214Right-handed alpha
Helix 12
AB3
A
226 234Right-handed alpha
Helix 13
AB4
A
246 248Right-handed 310
Helix 14
AB5
A
281 292Right-handed alpha
Helix 15
AB6
A
296 306Right-handed alpha
Helix 16
AB7
A
308 316Right-handed alpha
Helix 17
AB8
B
2 15Right-handed alpha
Helix 18
AB9
B
18 27Right-handed alpha
Helix 19
AC1
B
29 45Right-handed alpha
Helix 20
AC2
B
60 83Right-handed alpha
Helix 21
AC3
B
85 89Right-handed 310
Helix 22
AC4
B
100 107Right-handed alpha
Helix 23
AC5
B
108 119Right-handed alpha
Helix 24
AC6
B
130 141Right-handed alpha
Helix 25
AC7
B
205 213Right-handed alpha
Helix 26
AC8
B
226 234Right-handed alpha
Helix 27
AC9
B
244 248Right-handed 310
Helix 28
AD1
B
281 292Right-handed alpha
Helix 29
AD2
B
296 305Right-handed alpha
Helix 30
AD3
B
308 317Right-handed alpha
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There are 6 sheets in PDB entry 9F14. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
56 59anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 166first strand
Strand 2
A
268 274anti-parallel
Strand 3
A
145 148anti-parallel
Strand 4
A
93 99parallel
Strand 5
A
122 128parallel
Strand 6
B
219 224parallel
Strand 7
B
193 197parallel
Strand 8
B
240 242parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 260first strand
Strand 2
A
168 172anti-parallel
Strand 3
A
240 244anti-parallel
Strand 4
A
193 197parallel
Strand 5
A
219 224parallel
Strand 6
B
122 128parallel
Strand 7
B
93 99parallel
Strand 8
B
145 146parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 51first strand
Strand 2
B
56 59anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 166first strand
Strand 2
B
268 274anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 172first strand
Strand 2
B
257 260anti-parallel
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