Analysis of interatomic Contacts of Structural Units in PDB entry:
9F6U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9F6U entry

There are 2 chains in PDB entry 9F6U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 423
B
 GLY 2GLU 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 9F6U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 30Right-handed alpha
Helix 2
AA2
A
44 47Right-handed 310
Helix 3
AA3
A
66 69Right-handed 310
Helix 4
AA4
A
70 75Right-handed alpha
Helix 5
AA5
A
82 84Right-handed 310
Helix 6
AA6
A
96 102Right-handed alpha
Helix 7
AA7
A
105 122Right-handed alpha
Helix 8
AA8
A
141 155Right-handed alpha
Helix 9
AA9
A
176 192Right-handed alpha
Helix 10
AB1
A
200 210Right-handed alpha
Helix 11
AB2
A
217 234Right-handed alpha
Helix 12
AB3
A
235 237Right-handed 310
Helix 13
AB4
A
245 254Right-handed alpha
Helix 14
AB5
A
281 290Right-handed alpha
Helix 15
AB6
A
291 295Right-handed 310
Helix 16
AB7
A
300 304Right-handed 310
Helix 17
AB8
A
318 331Right-handed alpha
Helix 18
AB9
A
335 339Right-handed 310
Helix 19
AC1
A
368 382Right-handed alpha
Helix 20
AC2
A
398 420Right-handed alpha
Helix 21
AC3
B
11 29Right-handed alpha
Helix 22
AC4
B
70 78Right-handed alpha
Helix 23
AC5
B
85 87Right-handed 310
Helix 24
AC6
B
99 106Right-handed alpha
Helix 25
AC7
B
110 124Right-handed alpha
Helix 26
AC8
B
140 158Right-handed alpha
Helix 27
AC9
B
179 195Right-handed alpha
Helix 28
AD1
B
203 213Right-handed alpha
Helix 29
AD2
B
220 236Right-handed alpha
Helix 30
AD3
B
237 241Right-handed 310
Helix 31
AD4
B
248 257Right-handed alpha
Helix 32
AD5
B
284 292Right-handed alpha
Helix 33
AD6
B
293 298Right-handed 310
Helix 34
AD7
B
321 330Right-handed alpha
Helix 35
AD8
B
370 388Right-handed alpha
Helix 36
AD9
B
392 397Right-handed alpha
Helix 37
AE1
B
401 421Right-handed alpha
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There are 4 sheets in PDB entry 9F6U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
60 64parallel
Strand 3
A
4 10parallel
Strand 4
A
126 134parallel
Strand 5
A
160 166parallel
Strand 6
A
194 199parallel
Strand 7
A
261 267parallel
Strand 8
A
358 365anti-parallel
Strand 9
A
306 314anti-parallel
Strand 10
A
343 348parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
56 58anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 91first strand
Strand 2
B
62 66parallel
Strand 3
B
4 10parallel
Strand 4
B
129 137parallel
Strand 5
B
162 169parallel
Strand 6
B
197 202parallel
Strand 7
B
264 270parallel
Strand 8
B
360 368anti-parallel
Strand 9
B
309 318anti-parallel
Strand 10
B
347 351parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
58 60anti-parallel
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