Analysis of interatomic Contacts of Structural Units in PDB entry:
9F6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9F6Y entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 9F6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 53HIS 1334
B
 PRO 374LEU 382
B
 PRO 384PRO 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 9F6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 69Right-handed alpha
Helix 2
AA2
A
72 89Right-handed alpha
Helix 3
AA3
A
93 104Right-handed alpha
Helix 4
AA4
A
111 126Right-handed alpha
Helix 5
AA5
A
127 129Right-handed 310
Helix 6
AA6
A
130 146Right-handed alpha
Helix 7
AA7
A
156 160Right-handed 310
Helix 8
AA8
A
161 171Right-handed alpha
Helix 9
AA9
A
179 191Right-handed alpha
Helix 10
AB1
A
202 211Right-handed alpha
Helix 11
AB2
A
212 219Right-handed alpha
Helix 12
AB3
A
223 227Right-handed 310
Helix 13
AB4
A
259 264Right-handed 310
Helix 14
AB5
A
266 275Right-handed alpha
Helix 15
AB6
A
279 288Right-handed alpha
Helix 16
AB7
A
297 315Right-handed alpha
Helix 17
AB8
A
328 344Right-handed alpha
Helix 18
AB9
A
348 361Right-handed alpha
Helix 19
AC1
A
368 384Right-handed alpha
Helix 20
AC2
A
393 403Right-handed alpha
Helix 21
AC3
A
417 423Right-handed alpha
Helix 22
AC4
A
423 438Right-handed alpha
Helix 23
AC5
A
452 464Right-handed alpha
Helix 24
AC6
A
472 481Right-handed alpha
Helix 25
AC7
A
485 487Right-handed 310
Helix 26
AC8
A
488 501Right-handed alpha
Helix 27
AC9
A
524 531Right-handed alpha
Helix 28
AD1
A
532 554Right-handed alpha
Helix 29
AD2
A
560 571Right-handed alpha
Helix 30
AD3
A
572 577Right-handed 310
Helix 31
AD4
A
581 587Right-handed alpha
Helix 32
AD5
A
587 595Right-handed alpha
Helix 33
AD6
A
599 612Right-handed alpha
Helix 34
AD7
A
616 633Right-handed alpha
Helix 35
AD8
A
638 655Right-handed alpha
Helix 36
AD9
A
660 666Right-handed alpha
Helix 37
AE1
A
671 675Right-handed 310
Helix 38
AE2
A
680 699Right-handed alpha
Helix 39
AE3
A
711 721Right-handed alpha
Helix 40
AE4
A
728 733Right-handed alpha
Helix 41
AE5
A
736 745Right-handed alpha
Helix 42
AE6
A
752 769Right-handed alpha
Helix 43
AE7
A
773 782Right-handed alpha
Helix 44
AE8
A
788 800Right-handed alpha
Helix 45
AE9
A
804 815Right-handed alpha
Helix 46
AF1
A
815 836Right-handed alpha
Helix 47
AF2
A
840 855Right-handed alpha
Helix 48
AF3
A
861 871Right-handed alpha
Helix 49
AF4
A
876 892Right-handed alpha
Helix 50
AF5
A
894 906Right-handed alpha
Helix 51
AF6
A
910 914Right-handed 310
Helix 52
AF7
A
916 928Right-handed alpha
Helix 53
AF8
A
934 940Right-handed alpha
Helix 54
AF9
A
958 963Right-handed alpha
Helix 55
AG1
A
963 977Right-handed alpha
Helix 56
AG2
A
980 992Right-handed alpha
Helix 57
AG3
A
993 998Right-handed 310
Helix 58
AG4
A
1000 1012Right-handed alpha
Helix 59
AG5
A
1012 1017Right-handed alpha
Helix 60
AG6
A
1025 1031Right-handed alpha
Helix 61
AG7
A
1064 1081Right-handed alpha
Helix 62
AG8
A
1099 1114Right-handed alpha
Helix 63
AG9
A
1118 1132Right-handed alpha
Helix 64
AH1
A
1141 1156Right-handed alpha
Helix 65
AH2
A
1157 1162Right-handed alpha
Helix 66
AH3
A
1162 1173Right-handed alpha
Helix 67
AH4
A
1174 1179Right-handed alpha
Helix 68
AH5
A
1187 1192Right-handed alpha
Helix 69
AH6
A
1200 1219Right-handed alpha
Helix 70
AH7
A
1220 1225Right-handed alpha
Helix 71
AH8
A
1225 1234Right-handed alpha
Helix 72
AH9
A
1235 1239Right-handed 310
Helix 73
AI1
A
1241 1253Right-handed alpha
Helix 74
AI2
A
1255 1263Right-handed alpha
Helix 75
AI3
A
1263 1285Right-handed alpha
Helix 76
AI4
A
1290 1305Right-handed alpha
Helix 77
AI5
A
1311 1320Right-handed alpha
Helix 78
AI6
A
1322 1329Right-handed alpha
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There are no sheets in PDB entry 9F6Y
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