Analysis of interatomic Contacts of Structural Units in PDB entry:
9F7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9F7B entry

There is 1 chain in PDB entry 9F7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 13GLY 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 9F7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 40Right-handed 310
Helix 2
AA2
A
41 49Right-handed alpha
Helix 3
AA3
A
71 87Right-handed alpha
Helix 4
AA4
A
100 116Right-handed alpha
Helix 5
AA5
A
140 158Right-handed alpha
Helix 6
AA6
A
176 191Right-handed alpha
Helix 7
AA7
A
196 221Right-handed alpha
Helix 8
AA8
A
253 265Right-handed alpha
Helix 9
AA9
A
267 276Right-handed alpha
Helix 10
AB1
A
288 292Right-handed 310
Helix 11
AB2
A
295 311Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 9F7B.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
54 57anti-parallel
Strand 3
A
28 31parallel
Strand 4
A
94 99parallel
Strand 5
A
120 126parallel
Strand 6
A
233 238parallel
Strand 7
A
279 283parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il