Analysis of interatomic Contacts of Structural Units in PDB entry:
9F7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9F7V entry

There are 2 chains in PDB entry 9F7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 4ARG 251
B
 HIS 4ARG 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9F7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 25Right-handed alpha
Helix 2
AA2
A
25 42Right-handed alpha
Helix 3
AA3
A
53 60Right-handed alpha
Helix 4
AA4
A
86 94Right-handed alpha
Helix 5
AA5
A
98 107Right-handed alpha
Helix 6
AA6
A
124 137Right-handed alpha
Helix 7
AA7
A
147 153Right-handed alpha
Helix 8
AA8
A
162 167Right-handed 310
Helix 9
AA9
A
194 217Right-handed alpha
Helix 10
AB1
A
231 243Right-handed alpha
Helix 11
AB2
A
244 247Right-handed 310
Helix 12
AB3
B
5 25Right-handed alpha
Helix 13
AB4
B
25 42Right-handed alpha
Helix 14
AB5
B
54 60Right-handed alpha
Helix 15
AB6
B
87 94Right-handed alpha
Helix 16
AB7
B
98 107Right-handed alpha
Helix 17
AB8
B
124 137Right-handed alpha
Helix 18
AB9
B
147 153Right-handed alpha
Helix 19
AC1
B
162 167Right-handed 310
Helix 20
AC2
B
194 217Right-handed alpha
Helix 21
AC3
B
231 243Right-handed alpha
Helix 22
AC4
B
244 247Right-handed 310
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There are 3 sheets in PDB entry 9F7V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 73first strand
Strand 2
A
46 50parallel
Strand 3
A
114 118parallel
Strand 4
A
140 145parallel
Strand 5
A
169 172parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 184first strand
Strand 2
A
187 191anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 73first strand
Strand 2
B
46 50parallel
Strand 3
B
114 118parallel
Strand 4
B
140 145parallel
Strand 5
B
169 172parallel
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