Analysis of interatomic Contacts of Structural Units in PDB entry:
9F80


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9F80 entry

There is 1 chain in PDB entry 9F80 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 165ASN 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9F80. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
166 180Right-handed alpha
Helix 2
AA2
A
183 192Right-handed alpha
Helix 3
AA3
A
219 235Right-handed alpha
Helix 4
AA4
A
260 268Right-handed alpha
Helix 5
AA5
A
283 286Right-handed 310
Helix 6
AA6
A
287 301Right-handed alpha
Helix 7
AA7
A
302 304Right-handed 310
Helix 8
AA8
A
316 324Right-handed alpha
Helix 9
AA9
A
325 336Right-handed alpha
Helix 10
AB1
A
336 342Right-handed alpha
Helix 11
AB2
A
343 357Right-handed alpha
Helix 12
AB3
A
360 368Right-handed alpha
Helix 13
AB4
A
371 387Right-handed alpha
Helix 14
AB5
A
392 408Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9F80.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 244first strand
Strand 2
A
247 253anti-parallel
Strand 3
A
201 208anti-parallel
Strand 4
A
270 281anti-parallel
Strand 5
A
311 312parallel
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