Analysis of interatomic Contacts of Structural Units in PDB entry:
9F9R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9F9R entry

There are 8 chains in PDB entry 9F9R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 47MET 387
B
 GLY 1ALA 6
C
 SER 47MET 387
D
 GLY 1ALA 6
E
 SER 47MET 387
F
 GLY 1ALA 6
G
 SER 47MET 387
H
 GLY 1ALA 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 83 helices in PDB entry 9F9R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 60Right-handed alpha
Helix 2
AA2
A
63 73Right-handed alpha
Helix 3
AA3
A
79 92Right-handed alpha
Helix 4
AA4
A
94 107Right-handed alpha
Helix 5
AA5
A
110 129Right-handed alpha
Helix 6
AA6
A
132 143Right-handed alpha
Helix 7
AA7
A
148 165Right-handed alpha
Helix 8
AA8
A
170 176Right-handed alpha
Helix 9
AA9
A
177 178Right-handed 310
Helix 10
AB1
A
179 183Right-handed 310
Helix 11
AB2
A
186 208Right-handed alpha
Helix 12
AB3
A
210 225Right-handed alpha
Helix 13
AB4
A
227 242Right-handed alpha
Helix 14
AB5
A
246 262Right-handed alpha
Helix 15
AB6
A
264 282Right-handed alpha
Helix 16
AB7
A
295 309Right-handed alpha
Helix 17
AB8
A
311 324Right-handed alpha
Helix 18
AB9
A
328 344Right-handed alpha
Helix 19
AC1
A
345 360Right-handed alpha
Helix 20
AC2
A
365 375Right-handed alpha
Helix 21
AC3
A
378 387Right-handed alpha
Helix 22
AC4
C
48 60Right-handed alpha
Helix 23
AC5
C
63 73Right-handed alpha
Helix 24
AC6
C
79 92Right-handed alpha
Helix 25
AC7
C
94 105Right-handed alpha
Helix 26
AC8
C
110 128Right-handed alpha
Helix 27
AC9
C
132 143Right-handed alpha
Helix 28
AD1
C
147 165Right-handed alpha
Helix 29
AD2
C
170 176Right-handed alpha
Helix 30
AD3
C
177 178Right-handed 310
Helix 31
AD4
C
179 183Right-handed 310
Helix 32
AD5
C
186 208Right-handed alpha
Helix 33
AD6
C
210 225Right-handed alpha
Helix 34
AD7
C
227 242Right-handed alpha
Helix 35
AD8
C
246 262Right-handed alpha
Helix 36
AD9
C
264 282Right-handed alpha
Helix 37
AE1
C
295 309Right-handed alpha
Helix 38
AE2
C
311 322Right-handed alpha
Helix 39
AE3
C
328 344Right-handed alpha
Helix 40
AE4
C
345 360Right-handed alpha
Helix 41
AE5
C
365 375Right-handed alpha
Helix 42
AE6
C
378 387Right-handed alpha
Helix 43
AE7
E
48 60Right-handed alpha
Helix 44
AE8
E
63 73Right-handed alpha
Helix 45
AE9
E
79 92Right-handed alpha
Helix 46
AF1
E
94 107Right-handed alpha
Helix 47
AF2
E
110 128Right-handed alpha
Helix 48
AF3
E
132 143Right-handed alpha
Helix 49
AF4
E
148 165Right-handed alpha
Helix 50
AF5
E
170 177Right-handed alpha
Helix 51
AF6
E
179 183Right-handed 310
Helix 52
AF7
E
186 208Right-handed alpha
Helix 53
AF8
E
210 224Right-handed alpha
Helix 54
AF9
E
227 242Right-handed alpha
Helix 55
AG1
E
246 262Right-handed alpha
Helix 56
AG2
E
264 282Right-handed alpha
Helix 57
AG3
E
295 309Right-handed alpha
Helix 58
AG4
E
311 324Right-handed alpha
Helix 59
AG5
E
328 344Right-handed alpha
Helix 60
AG6
E
345 360Right-handed alpha
Helix 61
AG7
E
365 375Right-handed alpha
Helix 62
AG8
E
378 387Right-handed alpha
Helix 63
AG9
G
48 60Right-handed alpha
Helix 64
AH1
G
63 73Right-handed alpha
Helix 65
AH2
G
79 92Right-handed alpha
Helix 66
AH3
G
94 107Right-handed alpha
Helix 67
AH4
G
110 128Right-handed alpha
Helix 68
AH5
G
132 143Right-handed alpha
Helix 69
AH6
G
147 165Right-handed alpha
Helix 70
AH7
G
170 176Right-handed alpha
Helix 71
AH8
G
177 178Right-handed 310
Helix 72
AH9
G
179 183Right-handed 310
Helix 73
AI1
G
186 208Right-handed alpha
Helix 74
AI2
G
210 224Right-handed alpha
Helix 75
AI3
G
227 242Right-handed alpha
Helix 76
AI4
G
246 262Right-handed alpha
Helix 77
AI5
G
264 282Right-handed alpha
Helix 78
AI6
G
295 309Right-handed alpha
Helix 79
AI7
G
311 324Right-handed alpha
Helix 80
AI8
G
328 344Right-handed alpha
Helix 81
AI9
G
345 360Right-handed alpha
Helix 82
AJ1
G
365 375Right-handed alpha
Helix 83
AJ2
G
378 387Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9F9R
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il