Analysis of interatomic Contacts of Structural Units in PDB entry:
9FA4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FA4 entry

There are 4 chains in PDB entry 9FA4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1GLY 391
D
 MET 1THR 710
A
 MET 1PRO 564
B
 PRO 2HIS 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 9FA4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
1 9Right-handed alpha
Helix 2
AA2
C
12 35Right-handed alpha
Helix 3
AA3
C
41 52Right-handed alpha
Helix 4
AA4
C
68 85Right-handed alpha
Helix 5
AA5
C
87 100Right-handed alpha
Helix 6
AA6
C
106 125Right-handed alpha
Helix 7
AA7
C
126 139Right-handed alpha
Helix 8
AA8
C
141 158Right-handed alpha
Helix 9
AA9
C
163 169Right-handed alpha
Helix 10
AB1
C
170 173Right-handed 310
Helix 11
AB2
C
174 189Right-handed alpha
Helix 12
AB3
C
193 197Right-handed 310
Helix 13
AB4
C
199 213Right-handed alpha
Helix 14
AB5
C
214 217Right-handed 310
Helix 15
AB6
C
218 224Right-handed alpha
Helix 16
AB7
C
239 258Right-handed alpha
Helix 17
AB8
C
277 308Right-handed alpha
Helix 18
AB9
C
318 320Right-handed 310
Helix 19
AC1
C
321 336Right-handed alpha
Helix 20
AC2
C
341 362Right-handed alpha
Helix 21
AC3
C
368 376Right-handed alpha
Helix 22
AC4
C
382 391Right-handed alpha
Helix 23
AC5
D
2 17Right-handed alpha
Helix 24
AC6
D
21 36Right-handed alpha
Helix 25
AC7
D
39 53Right-handed alpha
Helix 26
AC8
D
55 70Right-handed alpha
Helix 27
AC9
D
73 88Right-handed alpha
Helix 28
AD1
D
95 106Right-handed alpha
Helix 29
AD2
D
107 122Right-handed alpha
Helix 30
AD3
D
124 139Right-handed alpha
Helix 31
AD4
D
142 160Right-handed alpha
Helix 32
AD5
D
170 177Right-handed alpha
Helix 33
AD6
D
177 185Right-handed alpha
Helix 34
AD7
D
191 210Right-handed alpha
Helix 35
AD8
D
254 268Right-handed alpha
Helix 36
AD9
D
282 296Right-handed alpha
Helix 37
AE1
D
303 329Right-handed alpha
Helix 38
AE2
D
405 426Right-handed alpha
Helix 39
AE3
D
426 441Right-handed alpha
Helix 40
AE4
D
445 460Right-handed alpha
Helix 41
AE5
D
462 476Right-handed alpha
Helix 42
AE6
D
490 505Right-handed alpha
Helix 43
AE7
D
510 524Right-handed alpha
Helix 44
AE8
D
559 576Right-handed alpha
Helix 45
AE9
D
583 593Right-handed alpha
Helix 46
AF1
D
600 615Right-handed alpha
Helix 47
AF2
D
621 625Right-handed 310
Helix 48
AF3
D
628 641Right-handed alpha
Helix 49
AF4
D
654 661Right-handed alpha
Helix 50
AF5
D
667 686Right-handed alpha
Helix 51
AF6
D
689 701Right-handed alpha
Helix 52
AF7
D
704 709Right-handed alpha
Helix 53
AF8
A
17 21Right-handed 310
Helix 54
AF9
A
50 70Right-handed alpha
Helix 55
AG1
A
97 109Right-handed alpha
Helix 56
AG2
A
122 134Right-handed alpha
Helix 57
AG3
A
137 147Right-handed alpha
Helix 58
AG4
A
168 193Right-handed alpha
Helix 59
AG5
A
240 255Right-handed alpha
Helix 60
AG6
A
288 291Right-handed 310
Helix 61
AG7
A
344 356Right-handed alpha
Helix 62
AG8
A
414 424Right-handed alpha
Helix 63
AG9
A
443 456Right-handed alpha
Helix 64
AH1
A
462 466Right-handed 310
Helix 65
AH2
A
474 481Right-handed alpha
Helix 66
AH3
A
487 508Right-handed alpha
Helix 67
AH4
A
524 543Right-handed alpha
Helix 68
AH5
A
544 546Right-handed 310
Helix 69
AH6
A
547 561Right-handed alpha
Helix 70
AH7
B
10 14Right-handed 310
Helix 71
AH8
B
27 46Right-handed alpha
Helix 72
AH9
B
69 77Right-handed alpha
Helix 73
AI1
B
87 103Right-handed alpha
Helix 74
AI2
B
125 134Right-handed alpha
Helix 75
AI3
B
160 166Right-handed alpha
Helix 76
AI4
B
169 178Right-handed alpha
Helix 77
AI5
B
193 209Right-handed alpha
Helix 78
AI6
B
298 302Right-handed alpha
Helix 79
AI7
B
309 321Right-handed alpha
Helix 80
AI8
B
360 364Right-handed 310
Helix 81
AI9
B
408 425Right-handed alpha
Helix 82
AJ1
B
429 448Right-handed alpha
Helix 83
AJ2
B
449 466Right-handed alpha
Helix 84
AJ3
B
472 490Right-handed alpha
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There are 8 sheets in PDB entry 9FA4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
345 348first strand
Strand 2
D
550 554anti-parallel
Strand 3
D
396 397parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
75 81anti-parallel
Strand 3
A
9 15parallel
Strand 4
A
158 164parallel
Strand 5
A
202 208parallel
Strand 6
A
230 232parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 260first strand
Strand 2
A
283 286anti-parallel
Strand 3
A
331 339anti-parallel
Strand 4
A
384 389anti-parallel
Strand 5
A
372 379anti-parallel
Strand 6
A
360 364anti-parallel
Strand 7
A
317 318anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 429first strand
Strand 2
B
369 371anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 67first strand
Strand 2
B
51 56anti-parallel
Strand 3
B
3 8parallel
Strand 4
B
110 114parallel
Strand 5
B
151 154parallel
Strand 6
B
183 185parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
25 26anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
326 327first strand
Strand 2
B
250 253anti-parallel
Strand 3
B
213 218parallel
Strand 4
B
221 228anti-parallel
Strand 5
B
271 275anti-parallel
Strand 6
B
348 352anti-parallel
Strand 7
B
334 338anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 258first strand
Strand 2
B
322 323anti-parallel
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