Analysis of interatomic Contacts of Structural Units in PDB entry:
9FA7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FA7 entry

There are 4 chains in PDB entry 9FA7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	MET 1	GLY 391
D	MET 1	THR 710
A	MET 1	PRO 564
B	PRO 2	HIS 507

There are 86 helices in PDB entry 9FA7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	1	9	Right-handed alpha
Helix 2	AA2	C	12	35	Right-handed alpha
Helix 3	AA3	C	41	52	Right-handed alpha
Helix 4	AA4	C	68	85	Right-handed alpha
Helix 5	AA5	C	87	100	Right-handed alpha
Helix 6	AA6	C	106	125	Right-handed alpha
Helix 7	AA7	C	126	139	Right-handed alpha
Helix 8	AA8	C	141	158	Right-handed alpha
Helix 9	AA9	C	163	169	Right-handed alpha
Helix 10	AB1	C	170	173	Right-handed 310
Helix 11	AB2	C	174	189	Right-handed alpha
Helix 12	AB3	C	199	213	Right-handed alpha
Helix 13	AB4	C	214	217	Right-handed 310
Helix 14	AB5	C	218	224	Right-handed alpha
Helix 15	AB6	C	239	257	Right-handed alpha
Helix 16	AB7	C	277	308	Right-handed alpha
Helix 17	AB8	C	318	320	Right-handed 310
Helix 18	AB9	C	321	336	Right-handed alpha
Helix 19	AC1	C	341	362	Right-handed alpha
Helix 20	AC2	C	368	376	Right-handed alpha
Helix 21	AC3	C	382	391	Right-handed alpha
Helix 22	AC4	D	2	17	Right-handed alpha
Helix 23	AC5	D	21	36	Right-handed alpha
Helix 24	AC6	D	39	52	Right-handed alpha
Helix 25	AC7	D	56	70	Right-handed alpha
Helix 26	AC8	D	73	88	Right-handed alpha
Helix 27	AC9	D	95	106	Right-handed alpha
Helix 28	AD1	D	107	122	Right-handed alpha
Helix 29	AD2	D	124	139	Right-handed alpha
Helix 30	AD3	D	142	161	Right-handed alpha
Helix 31	AD4	D	168	177	Right-handed alpha
Helix 32	AD5	D	177	184	Right-handed alpha
Helix 33	AD6	D	193	212	Right-handed alpha
Helix 34	AD7	D	254	272	Right-handed alpha
Helix 35	AD8	D	282	296	Right-handed alpha
Helix 36	AD9	D	303	329	Right-handed alpha
Helix 37	AE1	D	405	426	Right-handed alpha
Helix 38	AE2	D	426	441	Right-handed alpha
Helix 39	AE3	D	446	460	Right-handed alpha
Helix 40	AE4	D	462	476	Right-handed alpha
Helix 41	AE5	D	490	505	Right-handed alpha
Helix 42	AE6	D	510	523	Right-handed alpha
Helix 43	AE7	D	556	577	Right-handed alpha
Helix 44	AE8	D	583	593	Right-handed alpha
Helix 45	AE9	D	600	615	Right-handed alpha
Helix 46	AF1	D	621	626	Right-handed alpha
Helix 47	AF2	D	628	641	Right-handed alpha
Helix 48	AF3	D	654	660	Right-handed alpha
Helix 49	AF4	D	667	686	Right-handed alpha
Helix 50	AF5	D	689	701	Right-handed alpha
Helix 51	AF6	D	704	709	Right-handed alpha
Helix 52	AF7	A	17	22	Right-handed 310
Helix 53	AF8	A	50	70	Right-handed alpha
Helix 54	AF9	A	97	109	Right-handed alpha
Helix 55	AG1	A	116	120	Right-handed 310
Helix 56	AG2	A	122	134	Right-handed alpha
Helix 57	AG3	A	137	147	Right-handed alpha
Helix 58	AG4	A	168	193	Right-handed alpha
Helix 59	AG5	A	240	255	Right-handed alpha
Helix 60	AG6	A	288	291	Right-handed 310
Helix 61	AG7	A	344	356	Right-handed alpha
Helix 62	AG8	A	414	425	Right-handed alpha
Helix 63	AG9	A	443	456	Right-handed alpha
Helix 64	AH1	A	462	466	Right-handed 310
Helix 65	AH2	A	474	482	Right-handed alpha
Helix 66	AH3	A	487	508	Right-handed alpha
Helix 67	AH4	A	524	543	Right-handed alpha
Helix 68	AH5	A	544	546	Right-handed 310
Helix 69	AH6	A	547	561	Right-handed alpha
Helix 70	AH7	B	10	14	Right-handed 310
Helix 71	AH8	B	27	45	Right-handed alpha
Helix 72	AH9	B	69	77	Right-handed alpha
Helix 73	AI1	B	87	103	Right-handed alpha
Helix 74	AI2	B	125	137	Right-handed alpha
Helix 75	AI3	B	160	168	Right-handed alpha
Helix 76	AI4	B	169	178	Right-handed alpha
Helix 77	AI5	B	193	208	Right-handed alpha
Helix 78	AI6	B	258	263	Right-handed alpha
Helix 79	AI7	B	298	303	Right-handed alpha
Helix 80	AI8	B	309	321	Right-handed alpha
Helix 81	AI9	B	360	364	Right-handed 310
Helix 82	AJ1	B	365	367	Right-handed 310
Helix 83	AJ2	B	408	425	Right-handed alpha
Helix 84	AJ3	B	429	448	Right-handed alpha
Helix 85	AJ4	B	449	466	Right-handed alpha
Helix 86	AJ5	B	472	490	Right-handed alpha

There are 8 sheets in PDB entry 9FA7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	345	347	first strand
Strand 2	D	552	554	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	87	first strand
Strand 2	A	75	81	anti-parallel
Strand 3	A	9	15	parallel
Strand 4	A	158	163	parallel
Strand 5	A	202	205	parallel
Strand 6	A	230	232	parallel
Strand 7	A	224	227	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	260	first strand
Strand 2	A	283	286	anti-parallel
Strand 3	A	334	339	anti-parallel
Strand 4	A	384	387	anti-parallel
Strand 5	A	372	379	anti-parallel
Strand 6	A	360	364	anti-parallel
Strand 7	A	317	319	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	429	first strand
Strand 2	B	369	371	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	8	first strand
Strand 2	B	51	56	parallel
Strand 3	B	61	67	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	8	first strand
Strand 2	B	51	56	parallel
Strand 3	B	3	4	parallel
Strand 4	B	109	113	parallel
Strand 5	B	150	154	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	17	first strand
Strand 2	B	25	26	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	218	first strand
Strand 2	B	221	228	anti-parallel
Strand 3	B	271	275	anti-parallel
Strand 4	B	349	352	anti-parallel
Strand 5	B	332	336	anti-parallel
Strand 6	B	325	329	anti-parallel
Strand 7	B	250	255	anti-parallel
Strand 8	B	212	218	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FA7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FA7