Analysis of interatomic Contacts of Structural Units in PDB entry:
9FAC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FAC entry

There are 5 chains in PDB entry 9FAC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 1LEU 117
B
SER 1LEU 117
C
SER 1LEU 117
D
SER 1LEU 117
E
SER 1LEU 117
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 9FAC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
65 69Right-handed 310
Helix 2
AA2
B
65 69Right-handed 310
Helix 3
AA3
C
65 69Right-handed 310
Helix 4
AA4
D
65 69Right-handed 310
Helix 5
AA5
E
65 69Right-handed 310
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There are 13 sheets in PDB entry 9FAC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
2 5first strand
Strand 2
B
2 5parallel
Strand 3
A
2 5parallel
Strand 4
C
2 5parallel
Strand 5
E
2 5parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
9 12first strand
Strand 2
B
9 12parallel
Strand 3
A
9 12parallel
Strand 4
C
9 12parallel
Strand 5
E
9 12parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
17 23first strand
Strand 2
B
17 23parallel
Strand 3
A
17 23parallel
Strand 4
C
17 23parallel
Strand 5
E
17 23parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
26 30first strand
Strand 2
B
26 30parallel
Strand 3
A
26 30parallel
Strand 4
C
26 30parallel
Strand 5
E
26 30parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
36 37first strand
Strand 2
B
36 37parallel
Strand 3
A
36 37parallel
Strand 4
C
36 37parallel
Strand 5
E
36 37parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
44 51first strand
Strand 2
B
44 51parallel
Strand 3
A
44 51parallel
Strand 4
C
44 51parallel
Strand 5
E
44 51parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
72 75first strand
Strand 2
B
72 75parallel
Strand 3
A
72 75parallel
Strand 4
C
72 75parallel
Strand 5
E
72 75parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
83 86first strand
Strand 2
B
83 86parallel
Strand 3
A
83 86parallel
Strand 4
C
83 86parallel
Strand 5
E
83 86parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
89 92first strand
Strand 2
B
89 92parallel
Strand 3
A
89 92parallel
Strand 4
C
89 92parallel
Strand 5
E
89 92parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
95 97first strand
Strand 2
B
95 97parallel
Strand 3
A
95 97parallel
Strand 4
C
95 97parallel
Strand 5
E
95 97parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
102 107first strand
Strand 2
B
102 107parallel
Strand 3
A
102 107parallel
Strand 4
C
102 107parallel
Strand 5
E
102 107parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
110 111first strand
Strand 2
B
110 111parallel
Strand 3
A
110 111parallel
Strand 4
C
110 111parallel
Strand 5
E
110 111parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
114 116first strand
Strand 2
D
114 116parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il