Analysis of interatomic Contacts of Structural Units in PDB entry:
9FBO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FBO entry

There are 2 chains in PDB entry 9FBO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 23ARG 550
B
 GLY 23ARG 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9FBO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 59Right-handed 310
Helix 2
AA2
A
75 79Right-handed 310
Helix 3
AA3
A
87 91Right-handed 310
Helix 4
AA4
A
93 107Right-handed alpha
Helix 5
AA5
A
128 144Right-handed alpha
Helix 6
AA6
A
154 159Right-handed alpha
Helix 7
AA7
A
161 181Right-handed alpha
Helix 8
AA8
A
191 196Right-handed 310
Helix 9
AA9
A
201 208Right-handed alpha
Helix 10
AB1
A
242 257Right-handed alpha
Helix 11
AB2
A
265 268Right-handed 310
Helix 12
AB3
A
287 301Right-handed alpha
Helix 13
AB4
A
312 317Right-handed alpha
Helix 14
AB5
A
328 340Right-handed alpha
Helix 15
AB6
A
382 386Right-handed 310
Helix 16
AB7
B
93 105Right-handed alpha
Helix 17
AB8
B
128 144Right-handed alpha
Helix 18
AB9
B
153 159Right-handed alpha
Helix 19
AC1
B
161 181Right-handed alpha
Helix 20
AC2
B
201 209Right-handed alpha
Helix 21
AC3
B
239 241Right-handed 310
Helix 22
AC4
B
242 256Right-handed alpha
Helix 23
AC5
B
265 268Right-handed 310
Helix 24
AC6
B
288 302Right-handed alpha
Helix 25
AC7
B
312 318Right-handed alpha
Helix 26
AC8
B
328 341Right-handed alpha
Helix 27
AC9
B
382 386Right-handed 310
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There are 12 sheets in PDB entry 9FBO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
185 188parallel
Strand 3
A
147 152parallel
Strand 4
A
111 117parallel
Strand 5
A
65 71parallel
Strand 6
A
32 38parallel
Strand 7
A
307 311parallel
Strand 8
A
270 274parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
50 51anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 229first strand
Strand 2
A
233 236anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 353first strand
Strand 2
A
373 375anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 361first strand
Strand 2
A
411 422parallel
Strand 3
A
398 408anti-parallel
Strand 4
A
387 389anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 188first strand
Strand 2
B
147 151parallel
Strand 3
B
110 116parallel
Strand 4
B
65 71parallel
Strand 5
B
32 37parallel
Strand 6
B
307 311parallel
Strand 7
B
270 274parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
50 51anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 229first strand
Strand 2
B
233 234anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
351 353first strand
Strand 2
B
373 375anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
358 361first strand
Strand 2
B
411 422parallel
Strand 3
B
398 408anti-parallel
Strand 4
B
387 389anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
515 516first strand
Strand 2
B
535 536anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
521 524first strand
Strand 2
B
527 530anti-parallel
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