Analysis of interatomic Contacts of Structural Units in PDB entry:
9FCG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FCG entry

There is 1 chain in PDB entry 9FCG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 49VAL 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9FCG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 71Right-handed 310
Helix 2
AA2
A
91 102Right-handed alpha
Helix 3
AA3
A
115 129Right-handed alpha
Helix 4
AA4
A
143 149Right-handed alpha
Helix 5
AA5
A
158 160Right-handed 310
Helix 6
AA6
A
168 180Right-handed alpha
Helix 7
AA7
A
213 221Right-handed alpha
Helix 8
AA8
A
242 253Right-handed alpha
Helix 9
AA9
A
265 277Right-handed alpha
Helix 10
AB1
A
288 292Right-handed 310
Helix 11
AB2
A
296 308Right-handed alpha
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There are 3 sheets in PDB entry 9FCG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 88first strand
Strand 2
A
62 66anti-parallel
Strand 3
A
55 59anti-parallel
Strand 4
A
107 112parallel
Strand 5
A
133 136parallel
Strand 6
A
154 157parallel
Strand 7
A
184 187parallel
Strand 8
A
226 230parallel
Strand 9
A
257 260parallel
Strand 10
A
280 283parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
166 167anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 193first strand
Strand 2
A
196 201anti-parallel
Strand 3
A
206 211anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il