Analysis of interatomic Contacts of Structural Units in PDB entry:
9FCT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FCT entry

There are 2 chains in PDB entry 9FCT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 26LYS 256
A
 GLU 27LYS 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 9FCT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
144 154Right-handed alpha
Helix 2
AA2
B
201 204Right-handed 310
Helix 3
AA3
B
217 220Right-handed 310
Helix 4
AA4
A
144 154Right-handed alpha
Helix 5
AA5
A
201 204Right-handed 310
Helix 6
AA6
A
217 220Right-handed 310
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There are 4 sheets in PDB entry 9FCT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 32first strand
Strand 2
B
245 255anti-parallel
Strand 3
B
113 117anti-parallel
Strand 4
B
79 87anti-parallel
Strand 5
B
69 76anti-parallel
Strand 6
B
124 128anti-parallel
Strand 7
B
224 231anti-parallel
Strand 8
B
175 183anti-parallel
Strand 9
B
189 199anti-parallel
Strand 10
B
206 207anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 53first strand
Strand 2
B
58 63anti-parallel
Strand 3
B
69 76anti-parallel
Strand 4
B
79 87anti-parallel
Strand 5
B
113 117anti-parallel
Strand 6
B
245 255anti-parallel
Strand 7
B
134 142anti-parallel
Strand 8
B
212 215anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
245 255anti-parallel
Strand 3
A
113 117anti-parallel
Strand 4
A
79 87anti-parallel
Strand 5
A
69 76anti-parallel
Strand 6
A
125 128anti-parallel
Strand 7
A
224 231anti-parallel
Strand 8
A
175 183anti-parallel
Strand 9
A
189 199anti-parallel
Strand 10
A
206 207anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
58 63anti-parallel
Strand 3
A
69 76anti-parallel
Strand 4
A
79 87anti-parallel
Strand 5
A
113 117anti-parallel
Strand 6
A
245 255anti-parallel
Strand 7
A
134 142anti-parallel
Strand 8
A
212 215anti-parallel
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