Analysis of interatomic Contacts of Structural Units in PDB entry:
9FEY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FEY entry

There are 5 chains in PDB entry 9FEY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 7	VAL 447
B	GLY 7	VAL 447
C	GLY 7	VAL 447
D	GLY 7	VAL 447
E	GLY 7	VAL 447

There are 50 helices in PDB entry 9FEY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	21	Right-handed alpha
Helix 2	AA2	A	70	73	Right-handed 310
Helix 3	AA3	A	84	91	Right-handed 310
Helix 4	AA4	A	139	143	Right-handed 310
Helix 5	AA5	A	170	173	Right-handed 310
Helix 6	AA6	A	218	225	Right-handed alpha
Helix 7	AA7	A	226	239	Right-handed alpha
Helix 8	AA8	A	246	272	Right-handed alpha
Helix 9	AA9	A	279	307	Right-handed alpha
Helix 10	AB1	A	309	446	Right-handed alpha
Helix 11	AB2	B	8	21	Right-handed alpha
Helix 12	AB3	B	70	73	Right-handed 310
Helix 13	AB4	B	84	91	Right-handed 310
Helix 14	AB5	B	139	143	Right-handed 310
Helix 15	AB6	B	170	173	Right-handed 310
Helix 16	AB7	B	218	225	Right-handed alpha
Helix 17	AB8	B	226	239	Right-handed alpha
Helix 18	AB9	B	246	272	Right-handed alpha
Helix 19	AC1	B	279	307	Right-handed alpha
Helix 20	AC2	B	309	446	Right-handed alpha
Helix 21	AC3	C	8	21	Right-handed alpha
Helix 22	AC4	C	70	73	Right-handed 310
Helix 23	AC5	C	84	91	Right-handed 310
Helix 24	AC6	C	139	143	Right-handed 310
Helix 25	AC7	C	170	174	Right-handed 310
Helix 26	AC8	C	218	225	Right-handed alpha
Helix 27	AC9	C	226	239	Right-handed alpha
Helix 28	AD1	C	246	272	Right-handed alpha
Helix 29	AD2	C	279	307	Right-handed alpha
Helix 30	AD3	C	309	446	Right-handed alpha
Helix 31	AD4	D	8	21	Right-handed alpha
Helix 32	AD5	D	70	73	Right-handed 310
Helix 33	AD6	D	84	91	Right-handed 310
Helix 34	AD7	D	139	143	Right-handed 310
Helix 35	AD8	D	170	173	Right-handed 310
Helix 36	AD9	D	218	225	Right-handed alpha
Helix 37	AE1	D	226	239	Right-handed alpha
Helix 38	AE2	D	246	272	Right-handed alpha
Helix 39	AE3	D	279	307	Right-handed alpha
Helix 40	AE4	D	309	446	Right-handed alpha
Helix 41	AE5	E	8	21	Right-handed alpha
Helix 42	AE6	E	70	73	Right-handed 310
Helix 43	AE7	E	84	91	Right-handed 310
Helix 44	AE8	E	139	143	Right-handed 310
Helix 45	AE9	E	170	173	Right-handed 310
Helix 46	AF1	E	218	225	Right-handed alpha
Helix 47	AF2	E	226	239	Right-handed alpha
Helix 48	AF3	E	246	272	Right-handed alpha
Helix 49	AF4	E	279	307	Right-handed alpha
Helix 50	AF5	E	309	446	Right-handed alpha

There are 15 sheets in PDB entry 9FEY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	83	first strand
Strand 2	A	114	118	anti-parallel
Strand 3	A	123	135	anti-parallel
Strand 4	A	56	68	anti-parallel
Strand 5	A	36	51	anti-parallel
Strand 6	A	164	168	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	106	first strand
Strand 2	A	123	135	anti-parallel
Strand 3	A	56	68	anti-parallel
Strand 4	A	36	51	anti-parallel
Strand 5	A	175	176	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	98	first strand
Strand 2	A	147	156	anti-parallel
Strand 3	A	203	216	anti-parallel
Strand 4	A	186	200	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	83	first strand
Strand 2	B	114	118	anti-parallel
Strand 3	B	123	135	anti-parallel
Strand 4	B	56	68	anti-parallel
Strand 5	B	36	51	anti-parallel
Strand 6	B	164	168	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	106	first strand
Strand 2	B	123	135	anti-parallel
Strand 3	B	56	68	anti-parallel
Strand 4	B	36	51	anti-parallel
Strand 5	B	175	176	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	98	first strand
Strand 2	B	147	156	anti-parallel
Strand 3	B	203	216	anti-parallel
Strand 4	B	186	200	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	83	first strand
Strand 2	C	114	118	anti-parallel
Strand 3	C	123	135	anti-parallel
Strand 4	C	101	106	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	83	first strand
Strand 2	C	114	118	anti-parallel
Strand 3	C	123	135	anti-parallel
Strand 4	C	56	68	anti-parallel
Strand 5	C	36	51	anti-parallel
Strand 6	C	164	168	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	98	first strand
Strand 2	C	147	156	anti-parallel
Strand 3	C	203	216	anti-parallel
Strand 4	C	186	200	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	83	first strand
Strand 2	D	114	118	anti-parallel
Strand 3	D	123	135	anti-parallel
Strand 4	D	56	68	anti-parallel
Strand 5	D	36	51	anti-parallel
Strand 6	D	164	168	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	101	106	first strand
Strand 2	D	123	135	anti-parallel
Strand 3	D	56	68	anti-parallel
Strand 4	D	36	51	anti-parallel
Strand 5	D	175	176	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	98	first strand
Strand 2	D	147	156	anti-parallel
Strand 3	D	203	216	anti-parallel
Strand 4	D	186	200	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	83	first strand
Strand 2	E	114	118	anti-parallel
Strand 3	E	123	135	anti-parallel
Strand 4	E	56	68	anti-parallel
Strand 5	E	36	51	anti-parallel
Strand 6	E	164	168	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	101	106	first strand
Strand 2	E	123	135	anti-parallel
Strand 3	E	56	68	anti-parallel
Strand 4	E	36	51	anti-parallel
Strand 5	E	175	176	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	96	98	first strand
Strand 2	E	147	156	anti-parallel
Strand 3	E	203	216	anti-parallel
Strand 4	E	186	200	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FEY

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FEY