Analysis of interatomic Contacts of Structural Units in PDB entry:
9FGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FGJ entry

There is 1 chain in PDB entry 9FGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 224GLU 1214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 9FGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
232 237Right-handed alpha
Helix 2
AA2
A
238 251Right-handed alpha
Helix 3
AA3
A
265 269Right-handed 310
Helix 4
AA4
A
283 308Right-handed alpha
Helix 5
AA5
A
319 323Right-handed 310
Helix 6
AA6
A
324 336Right-handed alpha
Helix 7
AA7
A
356 376Right-handed alpha
Helix 8
AA8
A
385 398Right-handed alpha
Helix 9
AA9
A
406 421Right-handed alpha
Helix 10
AB1
A
426 443Right-handed alpha
Helix 11
AB2
A
443 462Right-handed alpha
Helix 12
AB3
A
501 505Right-handed 310
Helix 13
AB4
A
523 529Right-handed alpha
Helix 14
AB5
A
530 537Right-handed alpha
Helix 15
AB6
A
538 541Right-handed 310
Helix 16
AB7
A
546 551Right-handed alpha
Helix 17
AB8
A
555 560Right-handed alpha
Helix 18
AB9
A
562 586Right-handed alpha
Helix 19
AC1
A
598 614Right-handed alpha
Helix 20
AC2
A
631 642Right-handed alpha
Helix 21
AC3
A
644 651Right-handed alpha
Helix 22
AC4
A
652 666Right-handed alpha
Helix 23
AC5
A
682 690Right-handed alpha
Helix 24
AC6
A
697 711Right-handed alpha
Helix 25
AC7
A
715 723Right-handed alpha
Helix 26
AC8
A
731 753Right-handed alpha
Helix 27
AC9
A
768 786Right-handed alpha
Helix 28
AD1
A
794 806Right-handed alpha
Helix 29
AD2
A
807 812Right-handed 310
Helix 30
AD3
A
821 828Right-handed alpha
Helix 31
AD4
A
898 901Right-handed 310
Helix 32
AD5
A
909 931Right-handed alpha
Helix 33
AD6
A
1039 1052Right-handed alpha
Helix 34
AD7
A
1052 1067Right-handed alpha
Helix 35
AD8
A
1068 1079Right-handed alpha
Helix 36
AD9
A
1081 1088Right-handed alpha
Helix 37
AE1
A
1092 1115Right-handed alpha
Helix 38
AE2
A
1124 1149Right-handed alpha
Helix 39
AE3
A
1153 1182Right-handed alpha
Helix 40
AE4
A
1191 1214Right-handed alpha
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There are 4 sheets in PDB entry 9FGJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 493first strand
Strand 2
A
520 521anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
623 625first strand
Strand 2
A
628 630anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
760 765first strand
Strand 2
A
833 838anti-parallel
Strand 3
A
886 896parallel
Strand 4
A
868 880anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 818first strand
Strand 2
A
860 862anti-parallel
Strand 3
A
847 848anti-parallel
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