Analysis of interatomic Contacts of Structural Units in PDB entry:
9FGU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FGU entry

There are 2 chains in PDB entry 9FGU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASN 334VAL 524
E
 GLU 1GLU 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 9FGU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
337 343Right-handed alpha
Helix 2
AA2
C
365 370Right-handed alpha
Helix 3
AA3
C
383 389Right-handed 310
Helix 4
AA4
C
404 410Right-handed alpha
Helix 5
AA5
C
416 422Right-handed alpha
Helix 6
AA6
C
438 443Right-handed alpha
Helix 7
AA7
C
479 483Right-handed 310
Helix 8
AA8
E
163 165Right-handed 310
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There are 8 sheets in PDB entry 9FGU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
354 358first strand
Strand 2
C
394 403anti-parallel
Strand 3
C
507 516anti-parallel
Strand 4
C
433 435anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
452 454first strand
Strand 2
C
492 494anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 5first strand
Strand 2
E
22 24anti-parallel
Strand 3
E
77 82anti-parallel
Strand 4
E
67 70anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 59first strand
Strand 2
E
45 51anti-parallel
Strand 3
E
34 39anti-parallel
Strand 4
E
92 97anti-parallel
Strand 5
E
107 108anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 59first strand
Strand 2
E
45 51anti-parallel
Strand 3
E
34 39anti-parallel
Strand 4
E
92 97anti-parallel
Strand 5
E
112 113anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
138 139first strand
Strand 2
E
152 157anti-parallel
Strand 3
E
204 209anti-parallel
Strand 4
E
196 201anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
144 145first strand
Strand 2
E
237 240parallel
Strand 3
E
218 224anti-parallel
Strand 4
E
167 173anti-parallel
Strand 5
E
176 182anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
144 145first strand
Strand 2
E
237 240parallel
Strand 3
E
218 224anti-parallel
Strand 4
E
232 233anti-parallel
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