Analysis of interatomic Contacts of Structural Units in PDB entry:
9FGZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FGZ entry

There are 6 chains in PDB entry 9FGZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 4	LEU 280
B	ILE 5	GLN 270
C	GLU 4	GLN 270
D	ILE 5	GLN 270
E	GLU 4	GLN 270
F	ILE 5	GLN 270

There are 81 helices in PDB entry 9FGZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	30	Right-handed 310
Helix 2	AA2	A	34	50	Right-handed alpha
Helix 3	AA3	A	88	110	Right-handed alpha
Helix 4	AA4	A	125	132	Right-handed alpha
Helix 5	AA5	A	149	154	Right-handed alpha
Helix 6	AA6	A	160	170	Right-handed alpha
Helix 7	AA7	A	170	180	Right-handed alpha
Helix 8	AA8	A	185	192	Right-handed alpha
Helix 9	AA9	A	205	221	Right-handed alpha
Helix 10	AB1	A	225	237	Right-handed alpha
Helix 11	AB2	A	240	262	Right-handed alpha
Helix 12	AB3	A	262	272	Right-handed alpha
Helix 13	AB4	B	26	30	Right-handed 310
Helix 14	AB5	B	34	51	Right-handed alpha
Helix 15	AB6	B	72	77	Right-handed alpha
Helix 16	AB7	B	88	97	Right-handed alpha
Helix 17	AB8	B	97	110	Right-handed alpha
Helix 18	AB9	B	125	132	Right-handed alpha
Helix 19	AC1	B	149	154	Right-handed alpha
Helix 20	AC2	B	160	170	Right-handed alpha
Helix 21	AC3	B	170	180	Right-handed alpha
Helix 22	AC4	B	185	192	Right-handed alpha
Helix 23	AC5	B	205	221	Right-handed alpha
Helix 24	AC6	B	225	238	Right-handed alpha
Helix 25	AC7	B	240	255	Right-handed alpha
Helix 26	AC8	B	255	262	Right-handed alpha
Helix 27	AC9	B	262	269	Right-handed alpha
Helix 28	AD1	C	26	30	Right-handed 310
Helix 29	AD2	C	34	51	Right-handed alpha
Helix 30	AD3	C	71	76	Right-handed alpha
Helix 31	AD4	C	88	97	Right-handed alpha
Helix 32	AD5	C	97	110	Right-handed alpha
Helix 33	AD6	C	125	132	Right-handed alpha
Helix 34	AD7	C	149	154	Right-handed alpha
Helix 35	AD8	C	160	170	Right-handed alpha
Helix 36	AD9	C	170	180	Right-handed alpha
Helix 37	AE1	C	185	192	Right-handed alpha
Helix 38	AE2	C	205	221	Right-handed alpha
Helix 39	AE3	C	225	238	Right-handed alpha
Helix 40	AE4	C	240	262	Right-handed alpha
Helix 41	AE5	C	262	269	Right-handed alpha
Helix 42	AE6	D	26	30	Right-handed 310
Helix 43	AE7	D	34	50	Right-handed alpha
Helix 44	AE8	D	71	76	Right-handed alpha
Helix 45	AE9	D	88	97	Right-handed alpha
Helix 46	AF1	D	97	110	Right-handed alpha
Helix 47	AF2	D	125	132	Right-handed alpha
Helix 48	AF3	D	149	154	Right-handed alpha
Helix 49	AF4	D	160	170	Right-handed alpha
Helix 50	AF5	D	170	180	Right-handed alpha
Helix 51	AF6	D	185	192	Right-handed alpha
Helix 52	AF7	D	205	221	Right-handed alpha
Helix 53	AF8	D	225	238	Right-handed alpha
Helix 54	AF9	D	240	255	Right-handed alpha
Helix 55	AG1	D	255	262	Right-handed alpha
Helix 56	AG2	D	262	269	Right-handed alpha
Helix 57	AG3	E	34	51	Right-handed alpha
Helix 58	AG4	E	71	76	Right-handed alpha
Helix 59	AG5	E	88	110	Right-handed alpha
Helix 60	AG6	E	125	133	Right-handed alpha
Helix 61	AG7	E	149	154	Right-handed alpha
Helix 62	AG8	E	160	170	Right-handed alpha
Helix 63	AG9	E	170	180	Right-handed alpha
Helix 64	AH1	E	185	192	Right-handed alpha
Helix 65	AH2	E	205	221	Right-handed alpha
Helix 66	AH3	E	225	237	Right-handed alpha
Helix 67	AH4	E	240	262	Right-handed alpha
Helix 68	AH5	E	262	269	Right-handed alpha
Helix 69	AH6	F	34	51	Right-handed alpha
Helix 70	AH7	F	71	76	Right-handed alpha
Helix 71	AH8	F	88	97	Right-handed alpha
Helix 72	AH9	F	97	110	Right-handed alpha
Helix 73	AI1	F	125	133	Right-handed alpha
Helix 74	AI2	F	149	154	Right-handed alpha
Helix 75	AI3	F	160	170	Right-handed alpha
Helix 76	AI4	F	170	180	Right-handed alpha
Helix 77	AI5	F	185	192	Right-handed alpha
Helix 78	AI6	F	205	221	Right-handed alpha
Helix 79	AI7	F	225	238	Right-handed alpha
Helix 80	AI8	F	240	262	Right-handed alpha
Helix 81	AI9	F	262	269	Right-handed alpha

There are 13 sheets in PDB entry 9FGZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	16	first strand
Strand 2	A	19	24	anti-parallel
Strand 3	A	56	60	parallel
Strand 4	A	114	119	parallel
Strand 5	A	136	139	parallel
Strand 6	A	197	198	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	69	70	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	124	first strand
Strand 2	A	146	147	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	16	first strand
Strand 2	B	19	24	anti-parallel
Strand 3	B	56	60	parallel
Strand 4	B	114	119	parallel
Strand 5	B	136	139	parallel
Strand 6	B	195	198	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	124	first strand
Strand 2	B	146	147	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	16	first strand
Strand 2	C	19	24	anti-parallel
Strand 3	C	56	60	parallel
Strand 4	C	114	119	parallel
Strand 5	C	136	139	parallel
Strand 6	C	197	198	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	123	124	first strand
Strand 2	C	146	147	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	16	first strand
Strand 2	D	19	24	anti-parallel
Strand 3	D	56	60	parallel
Strand 4	D	114	119	parallel
Strand 5	D	136	139	parallel
Strand 6	D	197	198	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	124	first strand
Strand 2	D	146	147	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	16	first strand
Strand 2	E	19	24	anti-parallel
Strand 3	E	56	60	parallel
Strand 4	E	114	119	parallel
Strand 5	E	136	139	parallel
Strand 6	E	197	198	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	124	first strand
Strand 2	E	146	147	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	16	first strand
Strand 2	F	19	24	anti-parallel
Strand 3	F	56	60	parallel
Strand 4	F	114	119	parallel
Strand 5	F	136	139	parallel
Strand 6	F	197	198	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	124	first strand
Strand 2	F	146	147	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FGZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FGZ