Analysis of interatomic Contacts of Structural Units in PDB entry:
9FHF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FHF entry

There are 4 chains in PDB entry 9FHF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ALA 2	ARG 553
A	ALA 2	ARG 556
C	ALA 2	ARG 556
B	ALA 2	ALA 555

There are152 helices in PDB entry 9FHF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	2	7	Right-handed alpha
Helix 2	AA2	D	7	21	Right-handed alpha
Helix 3	AA3	D	22	24	Right-handed 310
Helix 4	AA4	D	25	33	Right-handed alpha
Helix 5	AA5	D	35	40	Right-handed alpha
Helix 6	AA6	D	61	75	Right-handed alpha
Helix 7	AA7	D	76	86	Right-handed alpha
Helix 8	AA8	D	99	104	Right-handed alpha
Helix 9	AA9	D	118	138	Right-handed alpha
Helix 10	AB1	D	157	160	Right-handed 310
Helix 11	AB2	D	161	171	Right-handed alpha
Helix 12	AB3	D	172	175	Right-handed 310
Helix 13	AB4	D	188	197	Right-handed alpha
Helix 14	AB5	D	198	199	Right-handed 310
Helix 15	AB6	D	200	202	Right-handed 310
Helix 16	AB7	D	215	234	Right-handed alpha
Helix 17	AB8	D	235	241	Right-handed 310
Helix 18	AB9	D	249	257	Right-handed alpha
Helix 19	AC1	D	259	261	Right-handed 310
Helix 20	AC2	D	271	275	Right-handed 310
Helix 21	AC3	D	278	280	Right-handed 310
Helix 22	AC4	D	281	289	Right-handed alpha
Helix 23	AC5	D	289	310	Right-handed alpha
Helix 24	AC6	D	311	314	Right-handed 310
Helix 25	AC7	D	315	330	Right-handed alpha
Helix 26	AC8	D	342	346	Right-handed 310
Helix 27	AC9	D	347	361	Right-handed alpha
Helix 28	AD1	D	385	390	Right-handed 310
Helix 29	AD2	D	391	398	Right-handed alpha
Helix 30	AD3	D	415	418	Right-handed 310
Helix 31	AD4	D	419	438	Right-handed alpha
Helix 32	AD5	D	441	453	Right-handed alpha
Helix 33	AD6	D	455	463	Right-handed alpha
Helix 34	AD7	D	464	467	Right-handed 310
Helix 35	AD8	D	483	506	Right-handed alpha
Helix 36	AD9	D	512	514	Right-handed 310
Helix 37	AE1	D	515	526	Right-handed alpha
Helix 38	AE2	D	527	530	Right-handed 310
Helix 39	AE3	D	539	553	Right-handed alpha
Helix 40	AE4	A	3	7	Right-handed alpha
Helix 41	AE5	A	7	21	Right-handed alpha
Helix 42	AE6	A	22	24	Right-handed 310
Helix 43	AE7	A	25	32	Right-handed alpha
Helix 44	AE8	A	35	40	Right-handed alpha
Helix 45	AE9	A	61	75	Right-handed alpha
Helix 46	AF1	A	76	86	Right-handed alpha
Helix 47	AF2	A	99	104	Right-handed alpha
Helix 48	AF3	A	118	138	Right-handed alpha
Helix 49	AF4	A	157	160	Right-handed 310
Helix 50	AF5	A	161	171	Right-handed alpha
Helix 51	AF6	A	172	175	Right-handed 310
Helix 52	AF7	A	188	197	Right-handed alpha
Helix 53	AF8	A	198	199	Right-handed 310
Helix 54	AF9	A	200	202	Right-handed 310
Helix 55	AG1	A	215	234	Right-handed alpha
Helix 56	AG2	A	235	241	Right-handed 310
Helix 57	AG3	A	249	257	Right-handed alpha
Helix 58	AG4	A	259	261	Right-handed 310
Helix 59	AG5	A	271	275	Right-handed 310
Helix 60	AG6	A	278	280	Right-handed 310
Helix 61	AG7	A	281	289	Right-handed alpha
Helix 62	AG8	A	289	310	Right-handed alpha
Helix 63	AG9	A	311	314	Right-handed 310
Helix 64	AH1	A	315	330	Right-handed alpha
Helix 65	AH2	A	342	346	Right-handed 310
Helix 66	AH3	A	347	361	Right-handed alpha
Helix 67	AH4	A	385	389	Right-handed 310
Helix 68	AH5	A	391	398	Right-handed alpha
Helix 69	AH6	A	416	418	Right-handed 310
Helix 70	AH7	A	419	439	Right-handed alpha
Helix 71	AH8	A	441	453	Right-handed alpha
Helix 72	AH9	A	455	463	Right-handed alpha
Helix 73	AI1	A	464	467	Right-handed 310
Helix 74	AI2	A	483	506	Right-handed alpha
Helix 75	AI3	A	512	514	Right-handed 310
Helix 76	AI4	A	515	529	Right-handed alpha
Helix 77	AI5	A	539	553	Right-handed alpha
Helix 78	AI6	C	3	7	Right-handed alpha
Helix 79	AI7	C	7	21	Right-handed alpha
Helix 80	AI8	C	22	24	Right-handed 310
Helix 81	AI9	C	25	33	Right-handed alpha
Helix 82	AJ1	C	35	40	Right-handed alpha
Helix 83	AJ2	C	61	75	Right-handed alpha
Helix 84	AJ3	C	76	86	Right-handed alpha
Helix 85	AJ4	C	99	104	Right-handed alpha
Helix 86	AJ5	C	118	138	Right-handed alpha
Helix 87	AJ6	C	157	160	Right-handed 310
Helix 88	AJ7	C	161	171	Right-handed alpha
Helix 89	AJ8	C	172	175	Right-handed 310
Helix 90	AJ9	C	188	197	Right-handed alpha
Helix 91	AK1	C	215	234	Right-handed alpha
Helix 92	AK2	C	235	241	Right-handed 310
Helix 93	AK3	C	249	257	Right-handed alpha
Helix 94	AK4	C	259	261	Right-handed 310
Helix 95	AK5	C	271	275	Right-handed 310
Helix 96	AK6	C	278	280	Right-handed 310
Helix 97	AK7	C	281	289	Right-handed alpha
Helix 98	AK8	C	289	310	Right-handed alpha
Helix 99	AK9	C	311	314	Right-handed 310
Helix 100	AL1	C	315	330	Right-handed alpha
Helix 101	AL2	C	342	346	Right-handed 310
Helix 102	AL3	C	347	361	Right-handed alpha
Helix 103	AL4	C	385	389	Right-handed 310
Helix 104	AL5	C	391	398	Right-handed alpha
Helix 105	AL6	C	415	418	Right-handed 310
Helix 106	AL7	C	419	439	Right-handed alpha
Helix 107	AL8	C	441	452	Right-handed alpha
Helix 108	AL9	C	455	463	Right-handed alpha
Helix 109	AM1	C	464	467	Right-handed 310
Helix 110	AM2	C	483	506	Right-handed alpha
Helix 111	AM3	C	512	514	Right-handed 310
Helix 112	AM4	C	515	529	Right-handed alpha
Helix 113	AM5	C	539	553	Right-handed alpha
Helix 114	AM6	B	7	21	Right-handed alpha
Helix 115	AM7	B	22	24	Right-handed 310
Helix 116	AM8	B	25	33	Right-handed alpha
Helix 117	AM9	B	35	40	Right-handed alpha
Helix 118	AN1	B	61	75	Right-handed alpha
Helix 119	AN2	B	76	86	Right-handed alpha
Helix 120	AN3	B	99	104	Right-handed alpha
Helix 121	AN4	B	118	138	Right-handed alpha
Helix 122	AN5	B	157	160	Right-handed 310
Helix 123	AN6	B	161	171	Right-handed alpha
Helix 124	AN7	B	172	175	Right-handed 310
Helix 125	AN8	B	188	197	Right-handed alpha
Helix 126	AN9	B	198	199	Right-handed 310
Helix 127	AO1	B	200	202	Right-handed 310
Helix 128	AO2	B	215	234	Right-handed alpha
Helix 129	AO3	B	235	237	Right-handed 310
Helix 130	AO4	B	238	242	Right-handed alpha
Helix 131	AO5	B	249	257	Right-handed alpha
Helix 132	AO6	B	259	261	Right-handed 310
Helix 133	AO7	B	271	275	Right-handed 310
Helix 134	AO8	B	278	280	Right-handed 310
Helix 135	AO9	B	281	289	Right-handed alpha
Helix 136	AP1	B	289	310	Right-handed alpha
Helix 137	AP2	B	311	314	Right-handed 310
Helix 138	AP3	B	315	330	Right-handed alpha
Helix 139	AP4	B	342	346	Right-handed 310
Helix 140	AP5	B	347	361	Right-handed alpha
Helix 141	AP6	B	385	390	Right-handed 310
Helix 142	AP7	B	391	398	Right-handed alpha
Helix 143	AP8	B	416	418	Right-handed 310
Helix 144	AP9	B	419	439	Right-handed alpha
Helix 145	AQ1	B	441	453	Right-handed alpha
Helix 146	AQ2	B	455	463	Right-handed alpha
Helix 147	AQ3	B	464	467	Right-handed 310
Helix 148	AQ4	B	483	506	Right-handed alpha
Helix 149	AQ5	B	512	514	Right-handed 310
Helix 150	AQ6	B	515	526	Right-handed alpha
Helix 151	AQ7	B	527	530	Right-handed 310
Helix 152	AQ8	B	539	553	Right-handed alpha

There are 12 sheets in PDB entry 9FHF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	45	first strand
Strand 2	D	50	54	anti-parallel
Strand 3	D	474	481	anti-parallel
Strand 4	D	404	411	parallel
Strand 5	D	335	340	parallel
Strand 6	D	378	380	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	112	113	first strand
Strand 2	D	116	117	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	180	184	first strand
Strand 2	D	151	155	parallel
Strand 3	D	204	209	parallel
Strand 4	D	243	247	parallel
Strand 5	D	263	265	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	45	first strand
Strand 2	A	50	54	anti-parallel
Strand 3	A	474	481	anti-parallel
Strand 4	A	404	411	parallel
Strand 5	A	335	340	parallel
Strand 6	A	378	380	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	113	first strand
Strand 2	A	116	117	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	180	184	first strand
Strand 2	A	151	155	parallel
Strand 3	A	204	209	parallel
Strand 4	A	243	247	parallel
Strand 5	A	263	265	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	45	first strand
Strand 2	C	50	54	anti-parallel
Strand 3	C	474	481	anti-parallel
Strand 4	C	404	411	parallel
Strand 5	C	335	340	parallel
Strand 6	C	378	380	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	112	113	first strand
Strand 2	C	116	117	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	180	184	first strand
Strand 2	C	151	155	parallel
Strand 3	C	204	209	parallel
Strand 4	C	243	247	parallel
Strand 5	C	263	265	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	45	first strand
Strand 2	B	50	54	anti-parallel
Strand 3	B	474	481	anti-parallel
Strand 4	B	404	411	parallel
Strand 5	B	335	340	parallel
Strand 6	B	378	380	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	113	first strand
Strand 2	B	116	117	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	184	first strand
Strand 2	B	151	155	parallel
Strand 3	B	204	209	parallel
Strand 4	B	243	247	parallel
Strand 5	B	263	265	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FHF

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FHF