Analysis of interatomic Contacts of Structural Units in PDB entry:
9FHT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FHT entry

There are 4 chains in PDB entry 9FHT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 12LYS 390
B
SER 11LYS 390
C
SER 11LYS 390
D
SER 11LYS 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 9FHT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
18 32Right-handed alpha
Helix 2
AA2
A
33 53Right-handed alpha
Helix 3
AA3
A
100 106Right-handed 310
Helix 4
AA4
A
107 130Right-handed alpha
Helix 5
AA5
A
131 146Right-handed alpha
Helix 6
AA6
A
171 176Right-handed 310
Helix 7
AA7
A
177 187Right-handed alpha
Helix 8
AA8
A
188 191Right-handed 310
Helix 9
AA9
A
197 218Right-handed alpha
Helix 10
AB1
A
218 226Right-handed alpha
Helix 11
AB2
A
229 246Right-handed alpha
Helix 12
AB3
A
248 259Right-handed alpha
Helix 13
AB4
A
259 268Right-handed alpha
Helix 14
AB5
A
274 279Right-handed alpha
Helix 15
AB6
A
282 302Right-handed alpha
Helix 16
AB7
A
303 305Right-handed 310
Helix 17
AB8
A
319 332Right-handed alpha
Helix 18
AB9
A
333 336Right-handed 310
Helix 19
AC1
A
347 361Right-handed alpha
Helix 20
AC2
A
362 373Right-handed alpha
Helix 21
AC3
A
380 384Right-handed 310
Helix 22
AC4
A
386 390Right-handed 310
Helix 23
AC5
B
18 32Right-handed alpha
Helix 24
AC6
B
33 53Right-handed alpha
Helix 25
AC7
B
100 106Right-handed 310
Helix 26
AC8
B
107 130Right-handed alpha
Helix 27
AC9
B
131 146Right-handed alpha
Helix 28
AD1
B
171 176Right-handed 310
Helix 29
AD2
B
177 187Right-handed alpha
Helix 30
AD3
B
188 191Right-handed 310
Helix 31
AD4
B
197 218Right-handed alpha
Helix 32
AD5
B
218 226Right-handed alpha
Helix 33
AD6
B
229 246Right-handed alpha
Helix 34
AD7
B
248 259Right-handed alpha
Helix 35
AD8
B
259 268Right-handed alpha
Helix 36
AD9
B
274 279Right-handed alpha
Helix 37
AE1
B
282 302Right-handed alpha
Helix 38
AE2
B
303 305Right-handed 310
Helix 39
AE3
B
318 332Right-handed alpha
Helix 40
AE4
B
333 336Right-handed 310
Helix 41
AE5
B
347 361Right-handed alpha
Helix 42
AE6
B
362 373Right-handed alpha
Helix 43
AE7
B
380 384Right-handed 310
Helix 44
AE8
B
386 390Right-handed 310
Helix 45
AE9
C
18 32Right-handed alpha
Helix 46
AF1
C
33 53Right-handed alpha
Helix 47
AF2
C
100 105Right-handed 310
Helix 48
AF3
C
106 130Right-handed alpha
Helix 49
AF4
C
131 146Right-handed alpha
Helix 50
AF5
C
171 176Right-handed 310
Helix 51
AF6
C
177 187Right-handed alpha
Helix 52
AF7
C
188 191Right-handed 310
Helix 53
AF8
C
197 218Right-handed alpha
Helix 54
AF9
C
218 226Right-handed alpha
Helix 55
AG1
C
229 246Right-handed alpha
Helix 56
AG2
C
248 259Right-handed alpha
Helix 57
AG3
C
259 268Right-handed alpha
Helix 58
AG4
C
274 279Right-handed alpha
Helix 59
AG5
C
282 302Right-handed alpha
Helix 60
AG6
C
303 305Right-handed 310
Helix 61
AG7
C
319 332Right-handed alpha
Helix 62
AG8
C
333 336Right-handed 310
Helix 63
AG9
C
347 361Right-handed alpha
Helix 64
AH1
C
362 373Right-handed alpha
Helix 65
AH2
C
380 384Right-handed 310
Helix 66
AH3
C
386 390Right-handed 310
Helix 67
AH4
D
18 32Right-handed alpha
Helix 68
AH5
D
33 53Right-handed alpha
Helix 69
AH6
D
100 106Right-handed 310
Helix 70
AH7
D
107 130Right-handed alpha
Helix 71
AH8
D
131 146Right-handed alpha
Helix 72
AH9
D
171 176Right-handed 310
Helix 73
AI1
D
177 187Right-handed alpha
Helix 74
AI2
D
188 191Right-handed 310
Helix 75
AI3
D
197 218Right-handed alpha
Helix 76
AI4
D
218 226Right-handed alpha
Helix 77
AI5
D
229 246Right-handed alpha
Helix 78
AI6
D
248 259Right-handed alpha
Helix 79
AI7
D
259 268Right-handed alpha
Helix 80
AI8
D
274 279Right-handed alpha
Helix 81
AI9
D
282 302Right-handed alpha
Helix 82
AJ1
D
303 305Right-handed 310
Helix 83
AJ2
D
319 332Right-handed alpha
Helix 84
AJ3
D
333 336Right-handed 310
Helix 85
AJ4
D
345 347Right-handed 310
Helix 86
AJ5
D
348 361Right-handed alpha
Helix 87
AJ6
D
362 373Right-handed alpha
Helix 88
AJ7
D
380 384Right-handed 310
Helix 89
AJ8
D
386 390Right-handed 310
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There are 8 sheets in PDB entry 9FHT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
74 76first strand
Strand 2
A
159 162parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
80 81first strand
Strand 2
A
93 94anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
74 76first strand
Strand 2
B
159 162parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
80 81first strand
Strand 2
B
93 94anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
74 76first strand
Strand 2
C
159 162parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
80 81first strand
Strand 2
C
93 94anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
74 76first strand
Strand 2
D
159 162parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
80 81first strand
Strand 2
D
93 94anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il