Analysis of interatomic Contacts of Structural Units in PDB entry:
9FIZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FIZ entry

There is 1 chain in PDB entry 9FIZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 6ILE 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9FIZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 11Right-handed 310
Helix 2
AA2
A
32 43Right-handed alpha
Helix 3
AA3
A
56 58Right-handed 310
Helix 4
AA4
A
59 75Right-handed alpha
Helix 5
AA5
A
86 89Right-handed 310
Helix 6
AA6
A
90 98Right-handed alpha
Helix 7
AA7
A
138 143Right-handed alpha
Helix 8
AA8
A
153 169Right-handed alpha
Helix 9
AA9
A
208 212Right-handed 310
Helix 10
AB1
A
218 230Right-handed alpha
Helix 11
AB2
A
255 269Right-handed alpha
Helix 12
AB3
A
284 296Right-handed alpha
Helix 13
AB4
A
331 338Right-handed alpha
Helix 14
AB5
A
347 363Right-handed alpha
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There are 4 sheets in PDB entry 9FIZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
13 18parallel
Strand 3
A
146 151anti-parallel
Strand 4
A
128 132anti-parallel
Strand 5
A
117 124anti-parallel
Strand 6
A
339 345parallel
Strand 7
A
202 207anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 106first strand
Strand 2
A
78 84parallel
Strand 3
A
46 51parallel
Strand 4
A
117 124anti-parallel
Strand 5
A
339 345parallel
Strand 6
A
322 325anti-parallel
Strand 7
A
315 318anti-parallel
Strand 8
A
233 237anti-parallel
Strand 9
A
271 277parallel
Strand 10
A
302 307parallel
Strand 11
A
368 369anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
136 137parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 246first strand
Strand 2
A
251 253anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il