Analysis of interatomic Contacts of Structural Units in PDB entry:
9FKH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FKH entry

There are 2 chains in PDB entry 9FKH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3VAL 331
B
 SER 4VAL 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9FKH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 12Right-handed alpha
Helix 2
AA2
A
23 30Right-handed alpha
Helix 3
AA3
A
30 38Right-handed alpha
Helix 4
AA4
A
48 53Right-handed alpha
Helix 5
AA5
A
61 74Right-handed alpha
Helix 6
AA6
A
90 95Right-handed 310
Helix 7
AA7
A
103 122Right-handed alpha
Helix 8
AA8
A
147 154Right-handed alpha
Helix 9
AA9
A
156 169Right-handed alpha
Helix 10
AB1
A
183 200Right-handed alpha
Helix 11
AB2
A
219 232Right-handed alpha
Helix 12
AB3
A
260 281Right-handed alpha
Helix 13
AB4
A
298 302Right-handed 310
Helix 14
AB5
A
322 330Right-handed alpha
Helix 15
AB6
B
7 12Right-handed alpha
Helix 16
AB7
B
23 30Right-handed alpha
Helix 17
AB8
B
30 38Right-handed alpha
Helix 18
AB9
B
48 53Right-handed alpha
Helix 19
AC1
B
61 74Right-handed alpha
Helix 20
AC2
B
90 95Right-handed 310
Helix 21
AC3
B
103 122Right-handed alpha
Helix 22
AC4
B
147 154Right-handed alpha
Helix 23
AC5
B
156 169Right-handed alpha
Helix 24
AC6
B
183 200Right-handed alpha
Helix 25
AC7
B
219 232Right-handed alpha
Helix 26
AC8
B
260 281Right-handed alpha
Helix 27
AC9
B
298 302Right-handed 310
Helix 28
AD1
B
322 330Right-handed alpha
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There are 2 sheets in PDB entry 9FKH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
236 245parallel
Strand 3
A
285 290parallel
Strand 4
A
17 22parallel
Strand 5
A
40 43parallel
Strand 6
A
77 85parallel
Strand 7
A
128 133parallel
Strand 8
A
173 178parallel
Strand 9
A
206 209parallel
Strand 10
A
236 245parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 214first strand
Strand 2
B
236 245parallel
Strand 3
B
285 290parallel
Strand 4
B
17 22parallel
Strand 5
B
40 43parallel
Strand 6
B
77 85parallel
Strand 7
B
128 133parallel
Strand 8
B
173 178parallel
Strand 9
B
206 209parallel
Strand 10
B
236 245parallel
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