Analysis of interatomic Contacts of Structural Units in PDB entry:
9FL1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FL1 entry

There are 4 chains in PDB entry 9FL1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 2	ALA 328
B	PRO 2	GLN 329
C	PRO 2	ALA 328
D	PRO 2	TYR 326

There are 56 helices in PDB entry 9FL1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	22	Right-handed alpha
Helix 2	AA2	A	37	46	Right-handed alpha
Helix 3	AA3	A	84	89	Right-handed 310
Helix 4	AA4	A	102	107	Right-handed alpha
Helix 5	AA5	A	108	110	Right-handed 310
Helix 6	AA6	A	134	138	Right-handed 310
Helix 7	AA7	A	148	166	Right-handed alpha
Helix 8	AA8	A	191	196	Right-handed 310
Helix 9	AA9	A	208	217	Right-handed alpha
Helix 10	AB1	A	220	222	Right-handed 310
Helix 11	AB2	A	250	264	Right-handed alpha
Helix 12	AB3	A	278	283	Right-handed 310
Helix 13	AB4	A	294	296	Right-handed 310
Helix 14	AB5	A	313	328	Right-handed alpha
Helix 15	AB6	B	11	23	Right-handed alpha
Helix 16	AB7	B	37	46	Right-handed alpha
Helix 17	AB8	B	84	89	Right-handed 310
Helix 18	AB9	B	102	107	Right-handed alpha
Helix 19	AC1	B	108	110	Right-handed 310
Helix 20	AC2	B	134	138	Right-handed 310
Helix 21	AC3	B	148	166	Right-handed alpha
Helix 22	AC4	B	191	196	Right-handed 310
Helix 23	AC5	B	208	217	Right-handed alpha
Helix 24	AC6	B	220	222	Right-handed 310
Helix 25	AC7	B	250	264	Right-handed alpha
Helix 26	AC8	B	278	283	Right-handed 310
Helix 27	AC9	B	294	296	Right-handed 310
Helix 28	AD1	B	313	329	Right-handed alpha
Helix 29	AD2	C	11	22	Right-handed alpha
Helix 30	AD3	C	37	46	Right-handed alpha
Helix 31	AD4	C	84	89	Right-handed 310
Helix 32	AD5	C	102	107	Right-handed alpha
Helix 33	AD6	C	108	110	Right-handed 310
Helix 34	AD7	C	134	138	Right-handed 310
Helix 35	AD8	C	148	166	Right-handed alpha
Helix 36	AD9	C	191	196	Right-handed 310
Helix 37	AE1	C	208	217	Right-handed alpha
Helix 38	AE2	C	220	222	Right-handed 310
Helix 39	AE3	C	250	264	Right-handed alpha
Helix 40	AE4	C	278	283	Right-handed 310
Helix 41	AE5	C	294	296	Right-handed 310
Helix 42	AE6	C	313	328	Right-handed alpha
Helix 43	AE7	D	11	23	Right-handed alpha
Helix 44	AE8	D	37	46	Right-handed alpha
Helix 45	AE9	D	84	89	Right-handed 310
Helix 46	AF1	D	102	107	Right-handed alpha
Helix 47	AF2	D	108	110	Right-handed 310
Helix 48	AF3	D	134	138	Right-handed 310
Helix 49	AF4	D	148	166	Right-handed alpha
Helix 50	AF5	D	191	196	Right-handed 310
Helix 51	AF6	D	208	217	Right-handed alpha
Helix 52	AF7	D	220	222	Right-handed 310
Helix 53	AF8	D	250	264	Right-handed alpha
Helix 54	AF9	D	278	283	Right-handed 310
Helix 55	AG1	D	294	296	Right-handed 310
Helix 56	AG2	D	313	328	Right-handed alpha

There are 16 sheets in PDB entry 9FL1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	58	first strand
Strand 2	A	64	66	anti-parallel
Strand 3	A	69	75	anti-parallel
Strand 4	A	27	33	parallel
Strand 5	A	3	8	parallel
Strand 6	A	92	95	parallel
Strand 7	A	116	119	parallel
Strand 8	A	143	145	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	48	first strand
Strand 2	A	52	53	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	205	first strand
Strand 2	A	224	231	anti-parallel
Strand 3	A	167	177	parallel
Strand 4	A	236	245	anti-parallel
Strand 5	A	303	311	anti-parallel
Strand 6	A	289	292	anti-parallel
Strand 7	A	270	273	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	205	first strand
Strand 2	A	224	231	anti-parallel
Strand 3	A	167	177	parallel
Strand 4	A	236	245	anti-parallel
Strand 5	A	303	311	anti-parallel
Strand 6	A	297	299	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	58	first strand
Strand 2	B	64	66	anti-parallel
Strand 3	B	69	75	anti-parallel
Strand 4	B	27	33	parallel
Strand 5	B	3	8	parallel
Strand 6	B	92	95	parallel
Strand 7	B	116	119	parallel
Strand 8	B	143	145	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	48	first strand
Strand 2	B	52	53	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	224	231	anti-parallel
Strand 3	B	167	177	parallel
Strand 4	B	236	245	anti-parallel
Strand 5	B	303	311	anti-parallel
Strand 6	B	289	292	anti-parallel
Strand 7	B	270	273	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	224	231	anti-parallel
Strand 3	B	167	177	parallel
Strand 4	B	236	245	anti-parallel
Strand 5	B	303	311	anti-parallel
Strand 6	B	297	299	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	58	first strand
Strand 2	C	64	66	anti-parallel
Strand 3	C	69	75	anti-parallel
Strand 4	C	27	33	parallel
Strand 5	C	3	8	parallel
Strand 6	C	92	95	parallel
Strand 7	C	116	119	parallel
Strand 8	C	143	145	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	48	first strand
Strand 2	C	52	53	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	205	first strand
Strand 2	C	224	231	anti-parallel
Strand 3	C	167	177	parallel
Strand 4	C	236	245	anti-parallel
Strand 5	C	303	311	anti-parallel
Strand 6	C	289	292	anti-parallel
Strand 7	C	270	273	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	205	first strand
Strand 2	C	224	231	anti-parallel
Strand 3	C	167	177	parallel
Strand 4	C	236	245	anti-parallel
Strand 5	C	303	311	anti-parallel
Strand 6	C	297	299	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	58	first strand
Strand 2	D	64	66	anti-parallel
Strand 3	D	69	75	anti-parallel
Strand 4	D	27	33	parallel
Strand 5	D	3	8	parallel
Strand 6	D	92	95	parallel
Strand 7	D	116	119	parallel
Strand 8	D	143	145	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	48	first strand
Strand 2	D	52	53	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	205	first strand
Strand 2	D	224	231	anti-parallel
Strand 3	D	167	177	parallel
Strand 4	D	236	245	anti-parallel
Strand 5	D	303	311	anti-parallel
Strand 6	D	289	292	anti-parallel
Strand 7	D	270	273	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	205	first strand
Strand 2	D	224	231	anti-parallel
Strand 3	D	167	177	parallel
Strand 4	D	236	245	anti-parallel
Strand 5	D	303	311	anti-parallel
Strand 6	D	297	299	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FL1

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FL1