Analysis of interatomic Contacts of Structural Units in PDB entry:
9FM8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FM8 entry

There is 1 chain in PDB entry 9FM8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9FM8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
33 35Right-handed 310
Helix 3
AA3
A
36 43Right-handed alpha
Helix 4
AA4
A
49 57Right-handed alpha
Helix 5
AA5
A
66 75Right-handed alpha
Helix 6
AA6
A
76 78Right-handed 310
Helix 7
AA7
A
92 106Right-handed alpha
Helix 8
AA8
A
118 122Right-handed 310
Helix 9
AA9
A
135 147Right-handed alpha
Helix 10
AB1
A
148 150Right-handed 310
Helix 11
AB2
A
161 172Right-handed alpha
Helix 12
AB3
A
174 192Right-handed alpha
Helix 13
AB4
A
195 200Right-handed 310
Helix 14
AB5
A
202 223Right-handed alpha
Helix 15
AB6
A
232 250Right-handed alpha
Helix 16
AB7
A
254 270Right-handed alpha
Helix 17
AB8
A
276 284Right-handed 310
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There is 1 sheet (AA1) in PDB entry 9FM8.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
3 6parallel
Strand 3
A
59 62parallel
Strand 4
A
84 87parallel
Strand 5
A
109 116parallel
Strand 6
A
128 133anti-parallel
Strand 7
A
152 155parallel
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