Analysis of interatomic Contacts of Structural Units in PDB entry:
9FMZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FMZ entry

There are 5 chains in PDB entry 9FMZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
G
 SER 12ALA 155
C
 SER 12ALA 155
D
 SER 12ALA 155
B
 PRO 26ASN 70
A
 MET 1ARG 855
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 9FMZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
G
13 18Right-handed 310
Helix 2
AA2
G
23 38Right-handed alpha
Helix 3
AA3
G
43 56Right-handed alpha
Helix 4
AA4
G
60 82Right-handed alpha
Helix 5
AA5
G
87 101Right-handed alpha
Helix 6
AA6
G
102 114Right-handed alpha
Helix 7
AA7
G
115 133Right-handed alpha
Helix 8
AA8
G
137 155Right-handed alpha
Helix 9
AA9
C
14 18Right-handed 310
Helix 10
AB1
C
24 37Right-handed alpha
Helix 11
AB2
C
43 56Right-handed alpha
Helix 12
AB3
C
60 83Right-handed alpha
Helix 13
AB4
C
87 94Right-handed alpha
Helix 14
AB5
C
94 101Right-handed alpha
Helix 15
AB6
C
102 114Right-handed alpha
Helix 16
AB7
C
115 133Right-handed alpha
Helix 17
AB8
C
137 155Right-handed alpha
Helix 18
AB9
D
23 38Right-handed alpha
Helix 19
AC1
D
43 56Right-handed alpha
Helix 20
AC2
D
60 83Right-handed alpha
Helix 21
AC3
D
87 101Right-handed alpha
Helix 22
AC4
D
102 114Right-handed alpha
Helix 23
AC5
D
115 136Right-handed alpha
Helix 24
AC6
D
138 155Right-handed alpha
Helix 25
AC7
B
27 36Right-handed alpha
Helix 26
AC8
B
38 70Right-handed alpha
Helix 27
AC9
A
2 9Right-handed alpha
Helix 28
AD1
A
10 27Right-handed alpha
Helix 29
AD2
A
30 48Right-handed alpha
Helix 30
AD3
A
52 61Right-handed alpha
Helix 31
AD4
A
61 66Right-handed alpha
Helix 32
AD5
A
77 92Right-handed alpha
Helix 33
AD6
A
106 134Right-handed alpha
Helix 34
AD7
A
144 169Right-handed alpha
Helix 35
AD8
A
172 192Right-handed alpha
Helix 36
AD9
A
196 221Right-handed alpha
Helix 37
AE1
A
230 254Right-handed alpha
Helix 38
AE2
A
285 297Right-handed alpha
Helix 39
AE3
A
316 327Right-handed alpha
Helix 40
AE4
A
338 351Right-handed alpha
Helix 41
AE5
A
375 380Right-handed alpha
Helix 42
AE6
A
410 427Right-handed alpha
Helix 43
AE7
A
440 446Right-handed alpha
Helix 44
AE8
A
455 467Right-handed alpha
Helix 45
AE9
A
486 508Right-handed alpha
Helix 46
AF1
A
517 527Right-handed alpha
Helix 47
AF2
A
533 543Right-handed alpha
Helix 48
AF3
A
558 581Right-handed alpha
Helix 49
AF4
A
588 598Right-handed alpha
Helix 50
AF5
A
601 610Right-handed alpha
Helix 51
AF6
A
636 660Right-handed alpha
Helix 52
AF7
A
665 689Right-handed alpha
Helix 53
AF8
A
778 790Right-handed alpha
Helix 54
AF9
A
794 802Right-handed alpha
Helix 55
AG1
A
807 829Right-handed alpha
Helix 56
AG2
A
831 852Right-handed alpha
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There are 3 sheets in PDB entry 9FMZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 332first strand
Strand 2
A
306 312parallel
Strand 3
A
275 281parallel
Strand 4
A
355 358parallel
Strand 5
A
436 439anti-parallel
Strand 6
A
383 387anti-parallel
Strand 7
A
470 473parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 365first strand
Strand 2
A
479 481anti-parallel
Strand 3
A
391 392parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
706 710first strand
Strand 2
A
716 724anti-parallel
Strand 3
A
728 732anti-parallel
Strand 4
A
770 773anti-parallel
Strand 5
A
754 765anti-parallel
Strand 6
A
744 751anti-parallel
Strand 7
A
706 710anti-parallel
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