Analysis of interatomic Contacts of Structural Units in PDB entry:
9FNB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FNB entry

There are 4 chains in PDB entry 9FNB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 120GLY 254
A
 SER 120GLY 254
C
 SER 120GLY 254
D
 SER 120GLY 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9FNB

There are 9 sheets in PDB entry 9FNB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 126first strand
Strand 2
C
121 126parallel
Strand 3
B
121 126parallel
Strand 4
D
121 126parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
C
129 130parallel
Strand 3
B
129 130parallel
Strand 4
D
129 130parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
C
133 134parallel
Strand 3
B
133 134parallel
Strand 4
D
133 134parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 176first strand
Strand 2
C
141 176parallel
Strand 3
B
141 176parallel
Strand 4
D
141 176parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 187first strand
Strand 2
C
180 187parallel
Strand 3
B
180 187parallel
Strand 4
D
180 187parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 198first strand
Strand 2
C
191 198parallel
Strand 3
B
191 198parallel
Strand 4
D
191 198parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 206first strand
Strand 2
C
201 206parallel
Strand 3
B
201 206parallel
Strand 4
D
201 206parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 230first strand
Strand 2
C
209 230parallel
Strand 3
B
209 230parallel
Strand 4
D
209 230parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 252first strand
Strand 2
C
233 252parallel
Strand 3
B
233 252parallel
Strand 4
D
233 252parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il