Analysis of interatomic Contacts of Structural Units in PDB entry:
9FO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FO1 entry

There is 1 chain in PDB entry 9FO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6ALA 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9FO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 29Right-handed 310
Helix 2
AA2
A
35 44Right-handed alpha
Helix 3
AA3
A
57 68Right-handed alpha
Helix 4
AA4
A
70 75Right-handed alpha
Helix 5
AA5
A
106 112Right-handed alpha
Helix 6
AA6
A
113 115Right-handed 310
Helix 7
AA7
A
132 136Right-handed 310
Helix 8
AA8
A
170 186Right-handed alpha
Helix 9
AA9
A
207 219Right-handed alpha
Helix 10
AB1
A
226 250Right-handed alpha
Helix 11
AB2
A
252 254Right-handed 310
Helix 12
AB3
A
291 294Right-handed 310
Helix 13
AB4
A
321 330Right-handed alpha
Helix 14
AB5
A
345 350Right-handed alpha
Helix 15
AB6
A
413 431Right-handed alpha
Helix 16
AB7
A
443 447Right-handed 310
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There are 5 sheets in PDB entry 9FO1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 142first strand
Strand 2
A
117 122parallel
Strand 3
A
191 196parallel
Strand 4
A
11 17parallel
Strand 5
A
256 262parallel
Strand 6
A
299 302anti-parallel
Strand 7
A
46 48anti-parallel
Strand 8
A
312 313parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 297first strand
Strand 2
A
51 52anti-parallel
Strand 3
A
317 318parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
437 438anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
162 163anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 364first strand
Strand 2
A
375 380anti-parallel
Strand 3
A
383 388anti-parallel
Strand 4
A
394 398anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il