Analysis of interatomic Contacts of Structural Units in PDB entry:
9FO7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FO7 entry

There are 4 chains in PDB entry 9FO7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 VAL 5PRO 487
U
 VAL 5LEU 515
F
 ILE 7ARG 53
S
 ILE 4ARG 53
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 9FO7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
17 21Right-handed alpha
Helix 2
AA2
E
35 50Right-handed alpha
Helix 3
AA3
E
64 69Right-handed alpha
Helix 4
AA4
E
88 101Right-handed alpha
Helix 5
AA5
E
117 121Right-handed 310
Helix 6
AA6
E
123 142Right-handed alpha
Helix 7
AA7
E
154 164Right-handed alpha
Helix 8
AA8
E
233 235Right-handed 310
Helix 9
AA9
E
250 261Right-handed alpha
Helix 10
AB1
E
272 274Right-handed 310
Helix 11
AB2
E
275 290Right-handed alpha
Helix 12
AB3
E
306 317Right-handed alpha
Helix 13
AB4
E
327 338Right-handed alpha
Helix 14
AB5
E
351 356Right-handed alpha
Helix 15
AB6
E
368 381Right-handed alpha
Helix 16
AB7
E
403 410Right-handed alpha
Helix 17
AB8
E
439 447Right-handed alpha
Helix 18
AB9
E
463 475Right-handed alpha
Helix 19
AC1
U
17 21Right-handed alpha
Helix 20
AC2
U
35 49Right-handed alpha
Helix 21
AC3
U
64 69Right-handed alpha
Helix 22
AC4
U
88 103Right-handed alpha
Helix 23
AC5
U
117 121Right-handed 310
Helix 24
AC6
U
123 142Right-handed alpha
Helix 25
AC7
U
154 164Right-handed alpha
Helix 26
AC8
U
165 168Right-handed 310
Helix 27
AC9
U
250 259Right-handed alpha
Helix 28
AD1
U
272 274Right-handed 310
Helix 29
AD2
U
275 290Right-handed alpha
Helix 30
AD3
U
306 317Right-handed alpha
Helix 31
AD4
U
327 337Right-handed alpha
Helix 32
AD5
U
350 357Right-handed alpha
Helix 33
AD6
U
368 381Right-handed alpha
Helix 34
AD7
U
403 410Right-handed alpha
Helix 35
AD8
U
435 437Right-handed 310
Helix 36
AD9
U
438 446Right-handed alpha
Helix 37
AE1
U
450 453Right-handed 310
Helix 38
AE2
U
463 476Right-handed alpha
Helix 39
AE3
U
477 482Right-handed 310
Helix 40
AE4
U
487 492Right-handed alpha
Helix 41
AE5
F
8 28Right-handed alpha
Helix 42
AE6
F
28 41Right-handed alpha
Helix 43
AE7
S
5 28Right-handed alpha
Helix 44
AE8
S
28 40Right-handed alpha
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There are 9 sheets in PDB entry 9FO7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
8 10first strand
Strand 2
E
22 24anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
208 211first strand
Strand 2
E
193 205anti-parallel
Strand 3
E
181 190anti-parallel
Strand 4
E
170 176anti-parallel
Strand 5
E
27 33parallel
Strand 6
E
144 150parallel
Strand 7
E
109 113parallel
Strand 8
E
56 60parallel
Strand 9
E
80 85parallel
Strand 10
F
46 52anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
245 248first strand
Strand 2
E
228 231parallel
Strand 3
E
265 270parallel
Strand 4
E
295 300parallel
Strand 5
E
320 322parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
365 366first strand
Strand 2
E
419 422parallel
Strand 3
E
427 432anti-parallel
Strand 4
E
391 398anti-parallel
Strand 5
E
455 461anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
8 10first strand
Strand 2
U
22 24anti-parallel
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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
208 211first strand
Strand 2
U
193 205anti-parallel
Strand 3
U
181 190anti-parallel
Strand 4
U
170 176anti-parallel
Strand 5
U
28 33parallel
Strand 6
U
144 150parallel
Strand 7
U
108 113parallel
Strand 8
U
55 61parallel
Strand 9
U
80 85parallel
Strand 10
S
47 52anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
245 248first strand
Strand 2
U
228 231parallel
Strand 3
U
265 270parallel
Strand 4
U
295 300parallel
Strand 5
U
320 322parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
365 366first strand
Strand 2
U
419 422parallel
Strand 3
U
427 432anti-parallel
Strand 4
U
391 398anti-parallel
Strand 5
U
455 461anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
498 500first strand
Strand 2
U
505 507anti-parallel
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