Analysis of interatomic Contacts of Structural Units in PDB entry:
9FOF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FOF entry

There are 12 chains in PDB entry 9FOF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
q
 GLY 282ASN 345
r
 LEU 39TYR 74
A
 GLY 282ASN 345
B
 LEU 39TYR 74
C
 GLY 282ASN 345
D
 LEU 39TYR 74
E
 GLY 282ASN 345
F
 LEU 39TYR 74
G
 GLY 282ASN 345
H
 LEU 39TYR 74
I
 GLY 282ASN 345
J
 LEU 39TYR 74
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9FOF

There are 10 sheets in PDB entry 9FOF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
C
301 302parallel
Strand 3
q
301 302parallel
Strand 4
E
301 302parallel
Strand 5
G
301 302parallel
Strand 6
I
301 302parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 307first strand
Strand 2
C
305 307parallel
Strand 3
q
305 307parallel
Strand 4
E
305 307parallel
Strand 5
G
305 307parallel
Strand 6
I
305 307parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 312first strand
Strand 2
C
311 312parallel
Strand 3
q
311 312parallel
Strand 4
E
311 312parallel
Strand 5
G
311 312parallel
Strand 6
I
311 312parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 318first strand
Strand 2
C
317 318parallel
Strand 3
q
317 318parallel
Strand 4
E
317 318parallel
Strand 5
G
317 318parallel
Strand 6
I
317 318parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 324first strand
Strand 2
C
323 324parallel
Strand 3
q
323 324parallel
Strand 4
E
323 324parallel
Strand 5
G
323 324parallel
Strand 6
I
323 324parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 337first strand
Strand 2
C
328 337parallel
Strand 3
q
328 337parallel
Strand 4
E
328 337parallel
Strand 5
G
328 337parallel
Strand 6
I
328 337parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 343first strand
Strand 2
C
342 343parallel
Strand 3
q
342 343parallel
Strand 4
E
342 343parallel
Strand 5
G
342 343parallel
Strand 6
I
342 343parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 50first strand
Strand 2
D
40 50parallel
Strand 3
r
40 50parallel
Strand 4
F
40 50parallel
Strand 5
H
40 50parallel
Strand 6
J
40 50parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 65first strand
Strand 2
D
57 65parallel
Strand 3
r
57 65parallel
Strand 4
F
57 65parallel
Strand 5
H
57 65parallel
Strand 6
J
57 65parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
D
72 73parallel
Strand 3
r
72 73parallel
Strand 4
F
72 73parallel
Strand 5
H
72 73parallel
Strand 6
J
72 73parallel
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