Analysis of interatomic Contacts of Structural Units in PDB entry:
9FP4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FP4 entry

There are 2 chains in PDB entry 9FP4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 40ARG 360
B
 PRO 37ARG 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9FP4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 69Right-handed alpha
Helix 2
AA2
A
91 103Right-handed alpha
Helix 3
AA3
A
120 135Right-handed alpha
Helix 4
AA4
A
147 156Right-handed alpha
Helix 5
AA5
A
160 180Right-handed alpha
Helix 6
AA6
A
214 225Right-handed alpha
Helix 7
AA7
A
233 236Right-handed 310
Helix 8
AA8
A
237 252Right-handed alpha
Helix 9
AA9
A
254 258Right-handed 310
Helix 10
AB1
A
270 281Right-handed alpha
Helix 11
AB2
A
282 286Right-handed 310
Helix 12
AB3
A
292 301Right-handed alpha
Helix 13
AB4
A
304 310Right-handed alpha
Helix 14
AB5
A
317 331Right-handed alpha
Helix 15
AB6
A
343 355Right-handed alpha
Helix 16
AB7
A
356 359Right-handed 310
Helix 17
AB8
B
54 69Right-handed alpha
Helix 18
AB9
B
91 103Right-handed alpha
Helix 19
AC1
B
120 135Right-handed alpha
Helix 20
AC2
B
147 156Right-handed alpha
Helix 21
AC3
B
160 180Right-handed alpha
Helix 22
AC4
B
214 225Right-handed alpha
Helix 23
AC5
B
233 235Right-handed 310
Helix 24
AC6
B
237 251Right-handed alpha
Helix 25
AC7
B
254 258Right-handed 310
Helix 26
AC8
B
270 281Right-handed alpha
Helix 27
AC9
B
282 286Right-handed 310
Helix 28
AD1
B
292 301Right-handed alpha
Helix 29
AD2
B
304 310Right-handed alpha
Helix 30
AD3
B
317 331Right-handed alpha
Helix 31
AD4
B
343 355Right-handed alpha
Helix 32
AD5
B
356 359Right-handed 310
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There are 2 sheets in PDB entry 9FP4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 314first strand
Strand 2
A
259 267parallel
Strand 3
A
334 338parallel
Strand 4
A
45 48parallel
Strand 5
A
72 75parallel
Strand 6
A
107 110parallel
Strand 7
A
139 143parallel
Strand 8
A
208 211parallel
Strand 9
A
227 231parallel
Strand 10
A
259 267parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
313 314first strand
Strand 2
B
259 267parallel
Strand 3
B
334 338parallel
Strand 4
B
45 48parallel
Strand 5
B
72 75parallel
Strand 6
B
107 110parallel
Strand 7
B
139 143parallel
Strand 8
B
208 211parallel
Strand 9
B
227 231parallel
Strand 10
B
259 267parallel
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