Analysis of interatomic Contacts of Structural Units in PDB entry:
9FPC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FPC entry

There is 1 chain in PDB entry 9FPC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1SER 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9FPC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 5Right-handed 310
Helix 2
AA2
A
7 30Right-handed alpha
Helix 3
AA3
A
50 61Right-handed alpha
Helix 4
AA4
A
80 84Right-handed 310
Helix 5
AA5
A
96 103Right-handed alpha
Helix 6
AA6
A
103 119Right-handed alpha
Helix 7
AA7
A
127 143Right-handed alpha
Helix 8
AA8
A
146 156Right-handed alpha
Helix 9
AA9
A
170 176Right-handed alpha
Helix 10
AB1
A
181 194Right-handed alpha
Helix 11
AB2
A
206 217Right-handed alpha
Helix 12
AB3
A
240 253Right-handed alpha
Helix 13
AB4
A
274 285Right-handed alpha
Helix 14
AB5
A
288 296Right-handed alpha
Helix 15
AB6
A
298 321Right-handed alpha
Helix 16
AB7
A
324 336Right-handed alpha
Helix 17
AB8
A
338 349Right-handed alpha
Helix 18
AB9
A
349 366Right-handed alpha
Helix 19
AC1
A
374 384Right-handed alpha
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There are 2 sheets in PDB entry 9FPC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 205first strand
Strand 2
A
195 197anti-parallel
Strand 3
A
158 160anti-parallel
Strand 4
A
90 95parallel
Strand 5
A
35 40parallel
Strand 6
A
219 224parallel
Strand 7
A
257 262parallel
Strand 8
A
270 273anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
73 78anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il