Analysis of interatomic Contacts of Structural Units in PDB entry:
9FPL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FPL entry

There is 1 chain in PDB entry 9FPL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 ARG 3ARG 629
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 9FPL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
X
3 7Right-handed 310
Helix 2
AA2
X
10 24Right-handed alpha
Helix 3
AA3
X
27 36Right-handed alpha
Helix 4
AA4
X
39 45Right-handed alpha
Helix 5
AA5
X
73 109Right-handed alpha
Helix 6
AA6
X
119 131Right-handed alpha
Helix 7
AA7
X
138 153Right-handed alpha
Helix 8
AA8
X
161 166Right-handed alpha
Helix 9
AA9
X
169 179Right-handed alpha
Helix 10
AB1
X
185 197Right-handed alpha
Helix 11
AB2
X
204 235Right-handed alpha
Helix 12
AB3
X
245 249Right-handed 310
Helix 13
AB4
X
262 276Right-handed alpha
Helix 14
AB5
X
276 283Right-handed alpha
Helix 15
AB6
X
294 305Right-handed alpha
Helix 16
AB7
X
311 313Right-handed 310
Helix 17
AB8
X
314 321Right-handed alpha
Helix 18
AB9
X
337 346Right-handed alpha
Helix 19
AC1
X
367 369Right-handed 310
Helix 20
AC2
X
370 389Right-handed alpha
Helix 21
AC3
X
408 418Right-handed alpha
Helix 22
AC4
X
424 434Right-handed alpha
Helix 23
AC5
X
454 467Right-handed alpha
Helix 24
AC6
X
475 484Right-handed alpha
Helix 25
AC7
X
488 490Right-handed 310
Helix 26
AC8
X
491 496Right-handed alpha
Helix 27
AC9
X
497 511Right-handed alpha
Helix 28
AD1
X
528 544Right-handed alpha
Helix 29
AD2
X
546 550Right-handed 310
Helix 30
AD3
X
561 575Right-handed alpha
Helix 31
AD4
X
589 598Right-handed alpha
Helix 32
AD5
X
600 605Right-handed alpha
Helix 33
AD6
X
613 632Right-handed alpha
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There are 4 sheets in PDB entry 9FPL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
47 48first strand
Strand 2
X
56 57anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
240 244first strand
Strand 2
X
401 405anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
308 310first strand
Strand 2
X
288 293parallel
Strand 3
X
254 259parallel
Strand 4
X
324 329parallel
Strand 5
X
348 351parallel
Strand 6
X
362 363parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
520 524first strand
Strand 2
X
470 474parallel
Strand 3
X
440 443parallel
Strand 4
X
552 556parallel
Strand 5
X
577 580parallel
Strand 6
X
607 610parallel
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