Analysis of interatomic Contacts of Structural Units in PDB entry:
9FQ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FQ4 entry

There are 2 chains in PDB entry 9FQ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 148
A
 THR 150ASN 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 9FQ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 23Right-handed alpha
Helix 2
AA2
A
37 46Right-handed alpha
Helix 3
AA3
A
85 89Right-handed 310
Helix 4
AA4
A
102 107Right-handed alpha
Helix 5
AA5
A
108 110Right-handed 310
Helix 6
AA6
A
134 138Right-handed 310
Helix 7
AA7
A
148 166Right-handed alpha
Helix 8
AA8
A
208 217Right-handed alpha
Helix 9
AA9
A
220 222Right-handed 310
Helix 10
AB1
A
250 264Right-handed alpha
Helix 11
AB2
A
278 283Right-handed 310
Helix 12
AB3
A
294 296Right-handed 310
Helix 13
AB4
A
313 330Right-handed alpha
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There are 4 sheets in PDB entry 9FQ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
64 66anti-parallel
Strand 3
A
69 75anti-parallel
Strand 4
A
27 33parallel
Strand 5
A
3 8parallel
Strand 6
A
92 95parallel
Strand 7
A
116 119parallel
Strand 8
A
143 145parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
52 53anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 206first strand
Strand 2
A
224 231anti-parallel
Strand 3
A
167 177parallel
Strand 4
A
237 245anti-parallel
Strand 5
A
303 310anti-parallel
Strand 6
A
289 292anti-parallel
Strand 7
A
270 273parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 206first strand
Strand 2
A
224 231anti-parallel
Strand 3
A
167 177parallel
Strand 4
A
237 245anti-parallel
Strand 5
A
303 310anti-parallel
Strand 6
A
297 299anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il