Analysis of interatomic Contacts of Structural Units in PDB entry:
9FQV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FQV entry

There are 2 chains in PDB entry 9FQV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 13ALA 604
B
 GLN 43LEU 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9FQV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 46Right-handed alpha
Helix 2
AA2
A
47 52Right-handed alpha
Helix 3
AA3
A
52 61Right-handed alpha
Helix 4
AA4
A
65 90Right-handed alpha
Helix 5
AA5
A
96 105Right-handed alpha
Helix 6
AA6
A
107 140Right-handed alpha
Helix 7
AA7
A
142 152Right-handed alpha
Helix 8
AA8
A
165 181Right-handed alpha
Helix 9
AA9
A
186 212Right-handed alpha
Helix 10
AB1
A
213 218Right-handed 310
Helix 11
AB2
A
220 224Right-handed 310
Helix 12
AB3
A
243 260Right-handed alpha
Helix 13
AB4
A
263 269Right-handed alpha
Helix 14
AB5
A
274 305Right-handed alpha
Helix 15
AB6
A
306 310Right-handed 310
Helix 16
AB7
A
314 323Right-handed alpha
Helix 17
AB8
A
327 349Right-handed alpha
Helix 18
AB9
A
349 361Right-handed alpha
Helix 19
AC1
A
365 370Right-handed 310
Helix 20
AC2
A
378 396Right-handed alpha
Helix 21
AC3
A
397 424Right-handed alpha
Helix 22
AC4
A
469 475Right-handed alpha
Helix 23
AC5
A
482 509Right-handed alpha
Helix 24
AC6
A
510 517Right-handed alpha
Helix 25
AC7
A
518 542Right-handed alpha
Helix 26
AC8
A
558 574Right-handed alpha
Helix 27
AC9
A
575 596Right-handed alpha
Helix 28
AD1
A
596 601Right-handed alpha
Helix 29
AD2
B
78 84Right-handed alpha
Helix 30
AD3
B
87 91Right-handed 310
Helix 31
AD4
B
134 147Right-handed alpha
Helix 32
AD5
B
161 166Right-handed alpha
Helix 33
AD6
B
167 168Right-handed 310
Helix 34
AD7
B
169 173Right-handed 310
Helix 35
AD8
B
204 214Right-handed alpha
Helix 36
AD9
B
226 232Right-handed alpha
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There are 2 sheets in PDB entry 9FQV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 67first strand
Strand 2
B
44 52anti-parallel
Strand 3
B
253 264anti-parallel
Strand 4
B
239 246anti-parallel
Strand 5
B
151 156anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 201first strand
Strand 2
B
221 225anti-parallel
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