Analysis of interatomic Contacts of Structural Units in PDB entry:
9FQW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FQW entry

There are 2 chains in PDB entry 9FQW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 13ALA 604
B
 GLN 43LEU 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 9FQW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 46Right-handed alpha
Helix 2
AA2
A
52 60Right-handed alpha
Helix 3
AA3
A
62 64Right-handed 310
Helix 4
AA4
A
65 90Right-handed alpha
Helix 5
AA5
A
96 105Right-handed alpha
Helix 6
AA6
A
106 140Right-handed alpha
Helix 7
AA7
A
142 152Right-handed alpha
Helix 8
AA8
A
165 181Right-handed alpha
Helix 9
AA9
A
186 212Right-handed alpha
Helix 10
AB1
A
213 218Right-handed 310
Helix 11
AB2
A
220 224Right-handed 310
Helix 12
AB3
A
243 256Right-handed alpha
Helix 13
AB4
A
257 261Right-handed 310
Helix 14
AB5
A
262 268Right-handed alpha
Helix 15
AB6
A
274 305Right-handed alpha
Helix 16
AB7
A
306 310Right-handed 310
Helix 17
AB8
A
314 323Right-handed alpha
Helix 18
AB9
A
327 349Right-handed alpha
Helix 19
AC1
A
349 361Right-handed alpha
Helix 20
AC2
A
365 370Right-handed 310
Helix 21
AC3
A
378 396Right-handed alpha
Helix 22
AC4
A
397 425Right-handed alpha
Helix 23
AC5
A
469 475Right-handed alpha
Helix 24
AC6
A
482 509Right-handed alpha
Helix 25
AC7
A
510 517Right-handed alpha
Helix 26
AC8
A
518 542Right-handed alpha
Helix 27
AC9
A
558 573Right-handed alpha
Helix 28
AD1
A
575 596Right-handed alpha
Helix 29
AD2
B
78 84Right-handed alpha
Helix 30
AD3
B
87 91Right-handed 310
Helix 31
AD4
B
118 122Right-handed 310
Helix 32
AD5
B
134 147Right-handed alpha
Helix 33
AD6
B
161 168Right-handed 310
Helix 34
AD7
B
169 173Right-handed 310
Helix 35
AD8
B
204 214Right-handed alpha
Helix 36
AD9
B
226 232Right-handed alpha
Helix 37
AE1
B
233 237Right-handed 310
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There are 2 sheets in PDB entry 9FQW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 67first strand
Strand 2
B
44 52anti-parallel
Strand 3
B
253 261anti-parallel
Strand 4
B
239 245anti-parallel
Strand 5
B
152 156anti-parallel
Strand 6
B
183 185anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 201first strand
Strand 2
B
221 225anti-parallel
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